Evidence map›Paper›PMID 19376850›Full record

ArticleJournal of bacteriology2009

Functional domains of ExsA, the transcriptional activator of the Pseudomonas aeruginosa type III secretion system.

Evan D Brutinel, Christopher A Vakulskas, Timothy L Yahr

Open access · greenAbstract read
In one paragraph

Article in Journal of bacteriology, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 39 papers.

0numbers the graph read from it
0cells of the map it votes in
39citing papers in PubMed
3.1field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

39 citing papers in PubMed, 55 citations in OpenAlex.

  1. Article
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  3. A Twist of Fate: The Helix-Turn-Helix Motif inJournal of chemical information and modeling · 2025
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  4. Mapping genetic and phenotypic diversity ofbioRxiv : the preprint server for biology · 2025
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  11. Effects of human β-defensin 3 fused with carbohydrate-binding domain on the function of type III secretion system in Pseudomonas aeruginosa PA14.Brazilian journal of microbiology : [publication of the Brazilian Society for Microbiology] · 2020
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Evan D BrutinelUniversity of Iowa, Department of Microbiology, Iowa City, IA 52242-1101, USA.
Christopher A Vakulskas
Timothy L Yahr
University of Iowa · US

Funding

Regulation of Pseudomonas aeruginosa type III secretionR01AI055042 · NIAID · UNIVERSITY OF IOWA · PI YAHR, TIMOTHY L · 2003 to 2021
$4.4M
NIAID NIH HHS R01 AI055042NIAID NIH HHS R01-AI055042-06
6 · The paper itself

Abstract

The opportunistic pathogen Pseudomonas aeruginosa utilizes a type III secretion system (T3SS) to evade phagocytosis and damage eukaryotic cells. Transcription of the T3SS regulon is controlled by ExsA, a member of the AraC/XylS family of transcriptional regulators. These family members generally consist of an approximately 100-amino acid carboxy-terminal domain (CTD) with two helix-turn-helix DNA binding motifs and an approximately 200-amino acid amino-terminal domain (NTD) with known functions including oligomerization and ligand binding. In the present study, we show that the CTD of ExsA binds to ExsA-dependent promoters in vitro and activates transcription from ExsA-dependent promoters both in vitro and in vivo. Despite possessing these activities, the CTD lacks the cooperative binding properties observed for full-length ExsA at the P(exsC) promoter. In addition, the CTD is unaffected by the negative regulatory activity of ExsD, an inhibitor of ExsA activity. Binding studies confirm that ExsD interacts directly with the NTD of ExsA. Our data are consistent with a model in which a single ExsA molecule first binds to a high-affinity site on the P(exsC) promoter. Protein-protein interactions mediated by the NTD then recruit an additional ExsA molecule to a second site on the promoter to form a complex capable of stimulating wild-type levels of transcription. These findings provide important insight into the mechanisms of transcriptional activation by ExsA and inhibition of ExsA activity by ExsD.

Indexed as

Transcriptional ActivationBacterial ProteinsBase SequenceBinding SitesMolecular Sequence DataPromoter Regions, GeneticProtein BindingProtein Structure, TertiaryProtein TransportPseudomonas aeruginosaRecombinant Fusion ProteinsTrans-ActivatorsBacterial ProteinsExsA protein, Pseudomonas aeruginosaRecombinant Fusion ProteinsTrans-Activators

Identifiers

PMID19376850
PMCPMC2698394
OpenAlexW2007747684

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.