Evidence map›Paper›PMID 19375443›Full record

ArticleToxicon : official journal of the International Society on Toxinology2009

cDNA cloning, expression and fibrin(ogen)olytic activity of two low-molecular weight snake venom metalloproteinases.

Ying Jia, Sara Lucena, Esteban Cantu, Elda E Sánchez, John C Pérez

Abstract read
In one paragraph

Article in Toxicon : official journal of the International Society on Toxinology, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
1.3field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 16 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Molecular cloning and characterization of cDNAs encoding metalloproteinases from snake venom glands.Toxicon : official journal of the International Society on Toxinology
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Ying JiaNatural Toxins Research Center, College of Arts and Sciences, Texas A&M University, Kingsville, TX 78363, USA.
Sara Lucena
Esteban Cantu
Elda E Sánchez
John C Pérez
Texas A&M University – Kingsville · US

Funding

Viper Resource Center (VRC) at Texas A&M University-KingsvilleP40RR018300 · NCRR · TEXAS A&M UNIVERSITY-KINGSVILLE · PI PEREZ, JOHN CARLOS · 2003 to 2011
$4.5M
NCRR NIH HHS 2 P40RR018300-06NCRR NIH HHS P40 RR018300
6 · The paper itself

Abstract

Two cDNA clones, AplVMP1 and AplVMP2, were isolated from a snake (Agkistrodon piscivorus leucostoma) venom gland cDNA library. The full-length cDNA sequence of AplVMP1 with a calculated molecular mass of 46.61 kDa is 1233 bp in length. AplVMP1 encodes PI class metalloproteinase with an open reading frame of 411 amino acid residues that includes signal peptide, pro-domain and metalloproteinase domains. The full-length cDNA of the AplVMP2 (1371 bp) has a calculated molecular mass of 51.16 kDa and encodes PII class metalloproteinase. The open reading frame of AplVMP2 with a 457 amino acid residues is composed of signal peptide, pro-domain, metalloproteinase and disintegrin domains. AplVMP1 and AplVMP2 showed 85% and 93% amino acid identical to PI class enzyme Agkistrodon contortrix laticinctus ACLPREF and PII class enzyme Agkistrodon piscivorus piscivorus piscivostatin, respectively. When expressed in Escherichia coli, most of recombinant proteins of AplVMP1 and AplVMP2 were in insoluble inclusion bodies, with soluble yields of 0.7 mg/l and 0.4 mg/l bacterial culture, respectively. Both affinity purified recombinant proteins show proteolytic activity on fibrinogen, although having an activity lower than that of crude A. p. leucostoma venom. Proteolytic activities of AplVMP1 and AplVMP2 were completely abolished after incubation with a final concentration of 100 microM of EDTA or 1,10-phenanthroline. Both AplVMP1 and AplVMP2 were active in a fibrin-agarose plate but devoid of hemorrhagic activity when injected (up to 50 microg) subcutaneously into mice, and had no capacity to inhibit platelet aggregation.

Indexed as

Amino Acid SequenceBase SequenceChromatography, AffinityCloning, MolecularDNA, ComplementaryElectrophoresis, Polyacrylamide GelFibrinolysisHemorrhageHumansMetalloproteasesMolecular Sequence DataMolecular WeightOpen Reading FramesPlatelet AggregationPolymerase Chain ReactionSequence Homology, Amino AcidDNA, ComplementaryMetalloproteasesSnake Venoms

Identifiers

PMID19375443
PMCPMC3437927
OpenAlexW1977514492

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.