Evidence map›Paper›PMID 19374518›Full record

ArticlePharmacogenomics2009

Pharmacogenetics of nucleoside reverse-transcriptase inhibitor-associated peripheral neuropathy.

Asha R Kallianpur, Todd Hulgan

Open access · hybridAbstract read
In one paragraph

Article in Pharmacogenomics, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
22citing papers in PubMed, 1 pooled it
0.9field-weighted citation impact, top 29% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

22 citing papers in PubMed, 1 synthesis or guideline pooled it, 45 citations in OpenAlex.

  1. Pooled it
  2. Trial
  3. Review
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  5. Article
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  7. Article
  8. Global HIV neurology: a comprehensive review.AIDS (London, England) · 2019
    Review
  9. Article
  10. Article
  11. Article
  12. Article
  13. Review
  14. Individualization of antiretroviral therapy--pharmacogenomic aspect.The Indian journal of medical research · 2015
    Review
  15. Article
  16. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

Asha R KallianpurDepartment of Medicine, Vanderbilt University, 2525 West End Avenue, Suite 600, Nashville, TN 37203-31738, USA. asha.kallianpur@vanderbilt.edu
Todd Hulgan
VA Tennessee Valley Healthcare System · US

Funding

Oxidant Stress and Antioxidants during HIV TherapyK23AT002508 · NCCIH · VANDERBILT UNIVERSITY · PI HULGAN, TODD M · 2004 to 2007
$473k
Mitochondrial Genomics and Peripheral Neuropathy during HIV TherapyR21NS059330 · NINDS · VANDERBILT UNIVERSITY · PI HULGAN, TODD M · 2007 to 2008
$422k
Iron as Nutritional Modifier Toxic Neuropathy HIV/AIDSR21HL087726 · NHLBI · VANDERBILT UNIVERSITY · PI KALLIANPUR, ASHA R · 2006 to 2007
$302k
NCCIH NIH HHS K23 AT002508NCCIH NIH HHS K23 AT002508-02NHLBI NIH HHS 5R21HL087726-02NHLBI NIH HHS R21 HL087726NINDS NIH HHS R21 NS059330NINDS NIH HHS R21 NS059330-02
6 · The paper itself

Abstract

Peripheral neuropathy is an important complication of antiretroviral therapy. Nucleoside reverse-transcriptase inhibitor (NRTI)-associated mitochondrial dysfunction, inflammation and nutritional factors are implicated in its pathogenesis. Pharmacogenetic and genomic studies investigating NRTI neurotoxicity have only recently become possible via the linkage of HIV clinical studies to large DNA repositories. Preliminary case-control studies using these resources suggest that host mitochondrial DNA haplogroup polymorphisms in the hemochromatosis gene and proinflammatory cytokine genes may influence the risk of peripheral neuropathy during antiretroviral therapy. These putative risk factors await confirmation in other HIV-infected populations but they have strong biological plausibility. Work to identify underlying mechanisms for these associations is ongoing. Large-scale studies incorporating clearly defined and validated methods of neuropathy assessment and the use of novel laboratory models of NRTI-associated neuropathy to clarify its pathophysiology are now needed. Such investigations may facilitate the development of more effective strategies to predict, prevent and ameliorate this debilitating treatment toxicity in diverse clinical settings.

Indexed as

PharmacogeneticsDNA, MitochondrialHemochromatosisHIV InfectionsHumansMitochondriaOxidative StressPeripheral Nervous System DiseasesPolymorphism, GeneticReverse Transcriptase InhibitorsRisk FactorsDNA, MitochondrialReverse Transcriptase Inhibitors

Identifiers

PMID19374518
PMCPMC2706211
OpenAlexW1994292108

What OpenQuestion holds

Textmetadata
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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.