Evidence map›Paper›PMID 19373929›Full record

ArticleCytometry. Part A : the journal of the International Society for Analytical Cytology2009

Induction of DNA damage response by the supravital probes of nucleic acids.

Hong Zhao, Frank Traganos, Jurek Dobrucki, Donald Wlodkowic, Zbigniew Darzynkiewicz

Open access · bronzeAbstract read
In one paragraph

Article in Cytometry. Part A : the journal of the International Society for Analytical Cytology, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 31 papers.

0numbers the graph read from it
0cells of the map it votes in
31citing papers in PubMed
4.2field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

31 citing papers in PubMed, 69 citations in OpenAlex.

  1. Tight association of autophagy and cell cycle in leukemia cells.Cellular & molecular biology letters · 2022
    Article
  2. Review
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Mitochondrial staining allows robust elimination of apoptotic and damaged cells during cell sorting.The journal of histochemistry and cytochemistry : official journal of the Histochemistry Society · 2014
    Article
  9. DNA damage signaling, impairment of cell cycle progression, and apoptosis triggered by 5-ethynyl-2'-deoxyuridine incorporated into DNA.Cytometry. Part A : the journal of the International Society for Analytical Cytology · 2013
    Article
  10. Article
  11. Article
  12. Real-time cell viability assays using a new anthracycline derivative DRAQ7®.Cytometry. Part A : the journal of the International Society for Analytical Cytology · 2013
    Article
  13. Article
  14. Biomarkers of cell senescence assessed by imaging cytometry.Methods in molecular biology (Clifton, N.J.) · 2013
    Article
  15. BubR1 is modified by sumoylation during mitotic progression.The Journal of biological chemistry · 2012
    Article
  16. Cell fixation in zinc salt solution is compatible with DNA damage response detection by phospho-specific antibodies.Cytometry. Part A : the journal of the International Society for Analytical Cytology · 2011
    Article
  17. Article
  18. Article
  19. Review
  20. In vitro generation of Plasmodium falciparum ookinetes.The American journal of tropical medicine and hygiene · 2010
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 3 institutions in 3 countries.

Hong ZhaoDepartment of Pathology, Brander Cancer Research Institute, New York Medical College, Valhalla, New York 10595, USA.
Frank Traganos
Jurek Dobrucki
Donald Wlodkowic
Zbigniew Darzynkiewicz
New York Medical College · USJagiellonian University · PLNIHR MindTech MedTech Co-operative · GB

Funding

PROBES FOR FLOW CYTOMETRYR01CA028704 · NCI · SLOAN-KETTERING INSTITUTE FOR CANCER RES · PI DARZYNKIEWICZ, ZBIGNIEW · 1985 to 2014
$6.0M
NCI NIH HHS CA28704NCI NIH HHS R01 CA028704
6 · The paper itself

Abstract

The aim of this study was to assess the potential DNA damage response (DDR) to four supravitally used biomarkers Hoechst 33342 (Ho 42), DRAQ5, DyeCycle Violet (DCV), and SYTO 17. A549 cells were exposed to these biomarkers at concentrations generally applied to live cells and their effect on histone H2AX (Ser 139), p53 (Ser15), ATM (Ser1981), and Chk2 (Thr68) phosphorylation was assessed using phospho-specific Abs. Short-term treatment with Ho 42 led to modest degree of ATM activation with no evidence of H2AX, Chk2, or p53 phosphorylation. However, pronounced ATM, Chk2, and p53 phosphorylation and perturbed G(2) progression were seen after 18 h. While short-term treatment with DRAQ5 induced ATM activation with no effect on H2AX, Chk2, and p53, dramatic changes marked by a high degree of H2AX, ATM, Chk2, and p53 phosphorylation, all occurring predominantly in S phase cells, and a block in cell cycle progression, were seen after 18 h exposure. These changes suggest that the DRAQ5-induced DNA lesions may become converted into double-strand DNA breaks during replication. Exposure to DCV also led to an increase in the level of activated ATM and Chk2 as well as of phosphorylated p53 and accumulation of cells in G(2)M and S phase. Exposure to SYTO 17 had no significant effect on any of the measured parameters. The data indicate that supravital use of Ho 42, DRAQ5, and DCV induces various degrees of DDR, including activation of ATM, Chk2 and p53, which may have significant consequences on regulatory cell cycle pathways and apoptosis.

Indexed as

DNA DamageAnthraquinonesAtaxia Telangiectasia Mutated ProteinsBenzimidazolesCell Cycle ProteinsCell Line, TumorCheckpoint Kinase 2DNADNA-Binding ProteinsDNA ProbesFluorescent DyesHistonesHumansPhosphorylationProtein Serine-Threonine KinasesTumor Suppressor Protein p531,5-bis((2-(methylamino)ethyl)amino)-4,8-dihydroxyanthracene-9,10-dioneAnthraquinonesAtaxia Telangiectasia Mutated ProteinsATM protein, humanBenzimidazolesbisbenzimide ethoxide trihydrochlorideCell Cycle ProteinsCheckpoint Kinase 2CHEK2 protein, humanDNADNA-Binding ProteinsDNA ProbesFluorescent DyesH2AX protein, humanHistonesProtein Serine-Threonine KinasesTumor Suppressor Protein p53Tumor Suppressor Proteins

Identifiers

PMID19373929
PMCPMC2749728
OpenAlexW2023726797

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.