Evidence map›Paper›PMID 19370306›Full record

ArticleJournal of gastroenterology2009

A phylogenetic study of hepatitis B virus in chronically infected Brazilian patients of Western and Asian descent.

Cintia Mendes Clemente, Flair José Carrilho, João Renato Rebello Pinho, Suzane Kioko Ono-Nita, Luiz Caetano Da Silva, Regina Célia Moreira, Marcílio Figueiredo Lemos, Isabel Maria Vicente Guedes de Carvalho Mello

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Article in Journal of gastroenterology, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
0.6field-weighted citation impact, top 28% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 13 citations in OpenAlex.

  1. Article
  2. Article
  3. Risk factors for hepatitis B transmission in South Brazil.Memorias do Instituto Oswaldo Cruz · 2017
    Article
  4. Article
  5. Distribution of HBV subgenotypes in Ribeirão Preto, Southeastern Brazil: a region with history of intense Italian immigration.The Brazilian journal of infectious diseases : an official publication of the Brazilian Society of Infectious Diseases
    Article
  6. HBV epidemiology and genetic diversity in an area of high prevalence of hepatitis B in southern Brazil.The Brazilian journal of infectious diseases : an official publication of the Brazilian Society of Infectious Diseases
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 2 countries.

Cintia Mendes ClementeDepartmento de Gastroenterologia, Faculdade de Medicina, Universidade de São Paulo, São Paulo 01246-902, Brazil. cintiamclemente@uol.com.br
Flair José Carrilho
João Renato Rebello Pinho
Suzane Kioko Ono-Nita
Luiz Caetano Da Silva
Regina Célia Moreira
Marcílio Figueiredo Lemos
Isabel Maria Vicente Guedes de Carvalho Mello
Universidade de São Paulo · BRInstituto Adolfo Lutz · BRInstituto Butantan · BR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundHepatitis B virus (HBV) causes one of the most important chronic viral infections worldwide. HBV is classified into eight genotypes whose epidemiology varies geographically. In Brazil, genotypes A, D, and F are more frequent, while in East Asia, genotypes B and C predominate. Several studies showed that immigrants retain the HBV infection pattern of their ancestral country. PURPOSE: To identify HBV genotypes infecting chronic carriers in Brazilian families of Western and Asian descent by Hepatitis B surface antigen gene sequencing and analyze the route of viral transmission by phylogenetic analysis of viral sequences.

methodsEighty-seven people chronically infected with HBV were separated into two groups: Western descent (27) and Asian descent (60). Surface and pre-core/core genes were amplified from serum HBV-DNA and sequences were subjected to phylogenetic analysis.

resultsHBV genotype A was found in 74% of Western subjects, while genotype C was found in 94% of Asian patients. Thirty-eight percent of Western families were infected with HBV with similar pre-core/core sequences, while only 25% of Asian families showed similarity in these sequences.

conclusionsPhylogenetical analysis of pre-core/core HBV gene suggested intra-familial transmission of HBV in 38% of Western families and 25% of Asian families. Analysis of HBsAg gene sequences helped to define the HBV genotype but did not allow inferring route of transmission as its sequences showed a smaller phylogenetic signal than pre-core/core sequences. Chronic HBV carriers of Asian descent born in or living in Brazil were infected with the same HBV genotype predominant in their ancestral country.

Indexed as

PhylogenyAdultAsiaBrazilEuropeFemaleGenotypeHepatitis B, ChronicHepatitis B virusHumansMaleSeroepidemiologic StudiesYoung Adult

Identifiers

PMID19370306
OpenAlexW2081347531

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.