Evidence map›Paper›PMID 19370158›Full record

ArticlePloS one2009

Short-term calorie restriction in male mice feminizes gene expression and alters key regulators of conserved aging regulatory pathways.

Preston Wayne Estep, Jason B Warner, Martha L Bulyk

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 51 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
51citing papers in PubMed, 2 pooled it
2.8field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

51 citing papers in PubMed, 2 syntheses or guidelines pooled it, 96 citations in OpenAlex.

  1. Pooled it
  2. Pooled it
  3. Review
  4. Article
  5. Review
  6. Article
  7. Article
  8. Article
  9. Ageing desexualizes theProceedings. Biological sciences · 2022
    Article
  10. Article
  11. NicotinamideBiomolecules · 2021
    Review
  12. Article
  13. Article
  14. Review
  15. Review
  16. Sex-dependent lifespan extension ofAging pathobiology and therapeutics · 2020
    Article
  17. Article
  18. Genetic and epigenetic regulation of human aging and longevity.Biochimica et biophysica acta. Molecular basis of disease · 2019
    Review
  19. Review
  20. Analysis of Polymorphisms in 59 Potential Candidate Genes for Association With Human Longevity.The journals of gerontology. Series A, Biological sciences and medical sciences · 2018
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 2 institutions in 2 countries.

Preston Wayne EstepLongenity Inc, Lincoln, MA, USA. pestep@post.harvard.edu
Jason B Warner
Martha L Bulyk
Brigham and Women's Hospital · USTE Connectivity (Switzerland) · CH

Funding

In Vivo Transcription Factor Binding in Skeletal MuscleF32AR051287 · NIAMS · BRIGHAM AND WOMEN'S HOSPITAL · PI WARNER, JASON B · 2005 to 2006
$64k
NIAMS NIH HHS F32 AR051287
6 · The paper itself

Abstract

backgroundCalorie restriction (CR) is the only intervention known to extend lifespan in a wide range of organisms, including mammals. However, the mechanisms by which it regulates mammalian aging remain largely unknown, and the involvement of the TOR and sirtuin pathways (which regulate aging in simpler organisms) remain controversial. Additionally, females of most mammals appear to live longer than males within species; and, although it remains unclear whether this holds true for mice, the relationship between sex-biased and CR-induced gene expression remains largely unexplored. METHODOLOGY/PRINCIPAL

findingsWe generated microarray gene expression data from livers of male mice fed high calorie or CR diets, and we find that CR significantly changes the expression of over 3,000 genes, many between 10- and 50-fold. We compare our data to the GenAge database of known aging-related genes and to prior microarray expression data of genes expressed differently between male and female mice. CR generally feminizes gene expression and many of the most significantly changed individual genes are involved in aging, hormone signaling, and p53-associated regulation of the cell cycle and apoptosis. Among the genes showing the largest and most statistically significant CR-induced expression differences are Ddit4, a key regulator of the TOR pathway, and Nnmt, a regulator of lifespan linked to the sirtuin pathway. Using western analysis we confirmed post-translational inhibition of the TOR pathway.

conclusionsOur data show that CR induces widespread gene expression changes and acts through highly evolutionarily conserved pathways, from microorganisms to mammals, and that its life-extension effects might arise partly from a shift toward a gene expression profile more typical of females.

Indexed as

Caloric RestrictionGene Expression RegulationLongevityAgingAnimalsApoptosisCarrier ProteinsCell CycleFemaleGene Expression ProfilingHormonesLiverMaleMiceNitrosaminesPhosphorylationCarrier ProteinsDdit4 protein, mouseHormonesmTOR protein, mouseNitrosaminesN-nitroso-N-methyltyraminePhosphotransferases (Alcohol Group Acceptor)SirtuinsTOR Serine-Threonine KinasesTranscription FactorsTyramine

Identifiers

PMID19370158
PMCPMC2667255
OpenAlexW2050037370

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.