Evidence map›Paper›PMID 19369699›Full record

ArticleThe Journal of biological chemistry2009

Anti-activator ExsD forms a 1:1 complex with ExsA to inhibit transcription of type III secretion operons.

Julie Thibault, Eric Faudry, Christine Ebel, Ina Attree, Sylvie Elsen

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 42 papers.

0numbers the graph read from it
0cells of the map it votes in
42citing papers in PubMed
3.3field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

42 citing papers in PubMed, 61 citations in OpenAlex.

  1. Article
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  4. Review
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  14. Microorganisms · 2019
    Review
  15. Fitting Pieces into the Puzzle ofJournal of bacteriology · 2019
    Review
  16. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 4 institutions in 1 country.

Julie ThibaultCommissariat à l'Energie Atomique, Institut de Recherches en Technologies et Sciences pour le Vivant, Laboratoire de Biochimie et de Biophysique des Systèmes Intégrés, F-38054 Grenoble.
Eric Faudry
Christine Ebel
Ina Attree
Sylvie Elsen
Centre National de la Recherche Scientifique · FRInstitut de Biologie Structurale · FRInstitut de Recherches en Technologies et Sciences pour le Vivant · FRUniversité Joseph Fourier · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The ExsA protein is a Pseudomonas aeruginosa transcriptional regulator of the AraC/XylS family that is responsible for activating the type III secretion system operons upon host cell contact. Its activity is known to be controlled in vivo through interaction with its negative regulator ExsD. Using a heterologous expression system, we demonstrated that ExsD is sufficient to inhibit the transcriptional activity of ExsA. Gel shift assays with ExsA- and ExsD-containing cytosolic extracts revealed that ExsD does not block DNA target sites but affects the DNA binding activity of the transcriptional activator. The ExsA-ExsD complex was purified after coproduction of the two partners in Escherichia coli. Size exclusion chromatography and ultracentrifugation analysis revealed a homogeneous complex with a 1:1 ratio. When in interaction with ExsD, ExsA is not able to bind to its specific target any longer, as evidenced by gel shift assays. Size exclusion chromatography further showed a partial dissociation of the complex in the presence of a specific DNA sequence. A model of the molecular inhibitory role of ExsD toward ExsA is proposed, in which, under noninducing conditions, the anti-activator ExsD sequesters ExsA and hinders its binding to DNA sites, preventing the transcription of type III secretion genes.

Indexed as

OperonTranscription, GeneticBacterial Proteinsbeta-GalactosidaseChromatography, GelCloning, MolecularCystic FibrosisEscherichia coliGenes, ReporterHumansImmunoblottingKineticsPlasmidsPseudomonas aeruginosaRecombinant Fusion ProteinsRecombinant ProteinsBacterial Proteinsbeta-GalactosidaseExsA protein, Pseudomonas aeruginosaExsD protein, Pseudomonas aeruginosaRecombinant Fusion ProteinsRecombinant ProteinsRepressor ProteinsTrans-Activators

Identifiers

PMID19369699
PMCPMC2708873
OpenAlexW2084046561

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.