Evidence map›Paper›PMID 19366901›Full record

ArticleThe Plant cell2009

Xanthomonas T3S Effector XopN Suppresses PAMP-Triggered Immunity and Interacts with a Tomato Atypical Receptor-Like Kinase and TFT1.

Jung-Gun Kim, Xinyan Li, Julie Anne Roden, Kyle W Taylor, Chris D Aakre, Bessie Su, Sylvie Lalonde, Angela Kirik, Yanhui Chen, Gayathri Baranage and 3 more

Open access · greenAbstract read
In one paragraph

Article in The Plant cell, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 102 papers.

0numbers the graph read from it
0cells of the map it votes in
102citing papers in PubMed
17.3field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

102 citing papers in PubMed, 202 citations in OpenAlex.

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  14. Overexpression ofPlants (Basel, Switzerland) · 2024
    Article
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  20. Review

42 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 3 institutions in 1 country.

Jung-Gun KimDepartment of Biology, Stanford University, Stanford, California 94305-5020, USA.
Xinyan Li
Julie Anne Roden
Kyle W Taylor
Chris D Aakre
Bessie Su
Sylvie Lalonde
Angela Kirik
Yanhui Chen
Gayathri Baranage
Heather McLane
Gregory B Martin
Mary Beth Mudgett
Stanford University · USCornell University · USDepartment of Plant Biology · US

Funding

NIGMS NIH HHS 1R01 GM-06886
6 · The paper itself

Abstract

XopN is a virulence factor from Xanthomonas campestris pathovar vesicatoria (Xcv) that is translocated into tomato (Solanum lycopersicum) leaf cells by the pathogen's type III secretion system. Xcv DeltaxopN mutants are impaired in growth and have reduced ability to elicit disease symptoms in susceptible tomato leaves. We show that XopN action in planta reduced pathogen-associated molecular pattern (PAMP)-induced gene expression and callose deposition in host tissue, indicating that XopN suppresses PAMP-triggered immune responses during Xcv infection. XopN is predicted to have irregular, alpha-helical repeats, suggesting multiple protein-protein interactions in planta. Consistent with this prediction, XopN interacted with the cytosolic domain of a Tomato Atypical Receptor-Like Kinase1 (TARK1) and four Tomato Fourteen-Three-Three isoforms (TFT1, TFT3, TFT5, and TFT6) in yeast. XopN/TARK1 and XopN/TFT1 interactions were confirmed in planta by bimolecular fluorescence complementation and pull-down analysis. Xcv DeltaxopN virulence defects were partially suppressed in transgenic tomato leaves with reduced TARK1 mRNA levels, indicating that TARK1 plays an important role in the outcome of Xcv-tomato interactions. These data provide the basis for a model in which XopN binds to TARK1 to interfere with TARK1-dependent signaling events triggered in response to Xcv infection.

Indexed as

Amino Acid MotifsBacterial ProteinsBinding SitesGene Expression Regulation, PlantGlucansImmunity, InnateMutationPhenotypePlant DiseasesPlant ProteinsPlants, Genetically ModifiedProtein IsoformsRNA InterferenceRNA, MessengerSignal TransductionSolanum lycopersicumBacterial ProteinscalloseGlucansPlant ProteinsProtein IsoformsRNA, MessengerVirulence Factors

Identifiers

PMID19366901
PMCPMC2685636
OpenAlexW2125261071

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.