Evidence map›Paper›PMID 19366690›Full record

ArticleThe Journal of biological chemistry2009

Adapter-mediated substrate selection for endoplasmic reticulum-associated degradation.

Kathleen Corcoran, Xiaoli Wang, Lonnie Lybarger

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.7field-weighted citation impact, top 32% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 6 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 2 institutions in 1 country.

Kathleen CorcoranDepartment of Immunobiology, University of Arizona, Tucson, AZ 85724, USA.
Xiaoli Wang
Lonnie Lybarger
University of Arizona · USWashington University in St. Louis · US

Funding

MHC-I regulation by herpes virusR01AI019687 · NIAID · WASHINGTON UNIVERSITY · PI FREMONT, DAVED H. · 1985 to 2016
$5.2M
Ubiquitin-mediated pathways of viral immune evasionR01AI060723 · NIAID · UNIVERSITY OF ARIZONA · PI LYBARGER, LONNIE P · 2004 to 2008
$1.7M
NIAID NIH HHS AI060723NIAID NIH HHS AI19687NIAID NIH HHS R01 AI019687NIAID NIH HHS R01 AI060723
6 · The paper itself

Abstract

During endoplasmic reticulum (ER)-associated degradation (ERAD), a relatively small number of ubiquitin ligases (E3) must be capable of ubiquitinating an assortment of substrates diverse in both structure and location (ER lumen, membrane, and/or cytosol). Therefore, mechanisms that operate independently of primary sequence determinants must exist to ensure specificity during this process. Here we provide direct evidence for adapter-mediated substrate recruitment for a virus-encoded ERAD E3 ligase, mK3. Members of an ER membrane protein complex that normally functions during major histocompatibility complex class I biogenesis in the immune system are required for mK3 substrate selection. We demonstrate that heterologous substrates could be ubiquitinated by mK3 if they were recruited by these ER accessory molecules to the proper position relative to the ligase domain of mK3. This mechanism of substrate recruitment by adapter proteins may explain the ability of some E3 ligases, including cellular ERAD E3 ligases, to specifically target the ubiquitination of multiple substrates that are unrelated in sequence.

Indexed as

Amino Acid SequenceAnimalsbeta 2-MicroglobulinCells, CulturedEmbryo, MammalianEndoplasmic ReticulumFibroblastsFlow CytometryHistocompatibility Antigens Class IImmunoblottingImmunoprecipitationMembrane Transport ProteinsMiceMice, KnockoutMolecular Sequence DataProteasome Endopeptidase Complexbeta 2-MicroglobulinHistocompatibility Antigens Class IMembrane Transport ProteinsProteasome Endopeptidase ComplextapasinUbiquitinUbiquitin-Protein Ligases

Identifiers

PMID19366690
PMCPMC2719388
OpenAlexW2000555535

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.