Evidence map›Paper›PMID 19366685›Full record

ArticleThe Journal of biological chemistry2009

The lateral gate of SecYEG opens during protein translocation.

David J F du Plessis, Greetje Berrelkamp, Nico Nouwen, Arnold J M Driessen

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 57 papers.

0numbers the graph read from it
0cells of the map it votes in
57citing papers in PubMed
7.3field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

57 citing papers in PubMed, 100 citations in OpenAlex.

  1. Article
  2. A unifying model for membrane protein biogenesis.Nature structural & molecular biology · 2024
    Review
  3. Article
  4. The Biogenesis of Multipass Membrane Proteins.Cold Spring Harbor perspectives in biology · 2023
    Review
  5. Mechanism of Protein Translocation by the Sec61 Translocon Complex.Cold Spring Harbor perspectives in biology · 2023
    Review
  6. Photoinduced movement: how photoirradiation induced the movements of matter.Science and technology of advanced materials · 2022
    Review
  7. Review
  8. DynamicsProceedings of the National Academy of Sciences of the United States of America · 2021
    Article
  9. Lateral gate dynamics of the bacterial translocon during cotranslational membrane protein insertion.Proceedings of the National Academy of Sciences of the United States of America · 2021
    Article
  10. Review
  11. The Dynamic SecYEG Translocon.Frontiers in molecular biosciences · 2021
    Review
  12. Article
  13. Review
  14. Review
  15. Review
  16. Article
  17. Review
  18. Protein translocation: what's the problem?Biochemical Society transactions · 2016
    Review
  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 2 countries.

David J F du PlessisDepartment of Molecular Microbiology, Groningen Biomolecular Sciences and Biotechnology Institute, University of Groningen, 9751 NN Haren, The Netherlands.
Greetje Berrelkamp
Nico Nouwen
Arnold J M Driessen
University of Groningen · NLCzech Academy of Sciences, Institute of Microbiology · CZ

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The SecYEG translocon of Escherichia coli mediates the translocation of preproteins across the cytoplasmic membrane. Here, we have examined the role of the proposed lateral gate of the translocon in translocation. A dual cysteine cross-linking approach allowed the introduction of cross-linker arms of various lengths between adjoining aminoacyl positions of transmembrane segments 2b and 7 of the lateral gate. Oxidation and short spacer linkers that fix the gate in the closed state abolished preprotein translocation, whereas long spacer linkers support translocation. The cross-linking data further suggests that SecYEG lateral gate opening and activation of the SecA ATPase are coupled processes. It is concluded that lateral gate opening is a critical step during SecA-dependent protein translocation.

Indexed as

Bacterial ProteinsCysteineCytoplasmDisulfidesEscherichia coliEscherichia coli ProteinsEuryarchaeotaMembrane ProteinsModels, MolecularMutagenesis, Site-DirectedPeptide HydrolasesPorinsProtein ConformationProtein PrecursorsProtein TransportSEC Translocation ChannelsAsmA protein, E coliBacterial ProteinsCysteineDisulfidesEscherichia coli ProteinsMembrane ProteinsompT protein, bacteriaPeptide HydrolasesPorinsProtein PrecursorsSEC Translocation Channels

Identifiers

PMID19366685
PMCPMC2708877
OpenAlexW1998777312

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.