Evidence map›Paper›PMID 19365646›Full record

ArticleJournal of molecular evolution2009

To investigate protein evolution by detecting suppressed epitope structures.

Stephen M Chong, J-P Jin

Abstract read
In one paragraph

Article in Journal of molecular evolution, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 38 papers.

0numbers the graph read from it
0cells of the map it votes in
38citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

38 citing papers in PubMed.

  1. Thin filament interaction and CaJournal of molecular and cellular cardiology · 2026
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  12. De Novo Missense Mutations inInternational journal of molecular sciences · 2021
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors.

Stephen M ChongSection of Molecular Cardiology, Evanston Northwestern Healthcare and Northwestern University, 2650 Ridge Avenue, Evanston, IL 60201, USA.
J-P Jin

Funding

Role of Troponin T Isoforms in Nemaline MyopathyR01AR048816 · NIAMS · WAYNE STATE UNIVERSITY · PI JIN, JIAN-PING · 2003 to 2014
$3.2M
Troponin structure &function in cardiomyopathyR01HL078773 · NHLBI · WAYNE STATE UNIVERSITY · PI JIN, JIAN-PING · 2005 to 2008
$1.3M
NHLBI NIH HHS HL078773NHLBI NIH HHS R01 HL078773NIAMS NIH HHS AR048816NIAMS NIH HHS R01 AR048816
6 · The paper itself

Abstract

Material remains of ancestor nucleotides and proteins are largely unavailable, thus sequence comparison among homologous genes in present-day organisms forms the core of current knowledge of molecular evolution. Variation in protein three-dimensional structure is a basis for functional diversity. To study the evolution of three-dimensional structures in related proteins would significantly improve our understanding of protein evolution and function. A protein may contain ancestor conformations that have been allosterically suppressed by evolutionarily additive structures. Using monoclonal antibody probes to detect such conformation in proteins after removing the suppressor structure, our study demonstrates three-dimensional structure evidence for the evolutionary relationship between troponin I and troponin T, two subunits of the troponin complex in the Ca(2+)-regulatory system of striated muscle, and among their muscle type-specific isoforms. The experimental data show the feasibility of detecting evolutionarily suppressed history-telling structural states in proteins by removing conformational modulator segments added during evolution. In addition to identifying structural modifications that were critical to the emergence of diverged proteins, investigating this novel mode of evolution will help us to understand the origin and functional potential of protein structures.

Indexed as

Evolution, MolecularAnimalsAntibodies, MonoclonalCross ReactionsEpitope MappingEpitopesHumansModels, BiologicalPhylogenyProtein IsoformsProteinsSequence Analysis, ProteinTroponin ITroponin TAntibodies, MonoclonalEpitopesProtein IsoformsProteinsTroponin ITroponin T

Identifiers

PMID19365646
PMCPMC2752406

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.