Evidence map›Paper›PMID 19363662›Full record

ArticleTAG. Theoretical and applied genetics. Theoretische und angewandte Genetik2009

A high-resolution map of the Grp1 locus on chromosome V of potato harbouring broad-spectrum resistance to the cyst nematode species Globodera pallida and Globodera rostochiensis.

Anna Finkers-Tomczak, Sarah Danan, Thijs van Dijk, Amelework Beyene, Liesbeth Bouwman, Hein Overmars, Herman van Eck, Aska Goverse, Jaap Bakker, Erin Bakker

Abstract read
In one paragraph

Article in TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed.

  1. Article
  2. Article
  3. Review
  4. SMRT-AgRenSeq-d in potato (Horticulture research · 2023
    Article
  5. Article
  6. Article
  7. Resisting Potato Cyst Nematodes With Resistance.Frontiers in plant science · 2021
    Review
  8. Article
  9. Graphical genotyping as a method to map NyTAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2017
    Article
  10. Review
  11. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Anna Finkers-TomczakLaboratory of Nematology, Plant Science Group, Wageningen University, Wageningen, The Netherlands.
Sarah Danan
Thijs van Dijk
Amelework Beyene
Liesbeth Bouwman
Hein Overmars
Herman van Eck
Aska Goverse
Jaap Bakker
Erin Bakker

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The Grp1 locus confers broad-spectrum resistance to the potato cyst nematode species Globodera pallida and Globodera rostochiensis and is located in the GP21-GP179 interval on the short arm of chromosome V of potato. A high-resolution map has been developed using the diploid mapping population RHAM026, comprising 1,536 genotypes. The flanking markers GP21 and GP179 have been used to screen the 1,536 genotypes for recombination events. Interval mapping of the resistances to G. pallida Pa2 and G. rostochiensis Ro5 resulted in two nearly identical LOD graphs with the highest LOD score just north of marker TG432. Detailed analysis of the 44 recombinant genotypes showed that G. pallida and G. rostochiensis resistance could not be separated and map to the same location between marker SPUD838 and TG432. It is suggested that the quantitative resistance to both nematode species at the Grp1 locus is mediated by one or more tightly linked R genes that might belong to the NBS-LRR class.

Indexed as

Chromosomes, PlantGenes, PlantSolanum tuberosumAnimalsChromosome MappingGenetic MarkersGenotypeImmunity, InnateLod ScorePlant DiseasesTylenchoideaGenetic Markers

Identifiers

PMID19363662
PMCPMC2690855

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.