Evidence map›Paper›PMID 19362738›Full record

ArticleLeukemia research2009

Identification of mitochondrial genome concatemers in AIDS-associated lymphomas and lymphoid cell lines.

Felipe Bedoya, Maria M Medveczky, Troy C Lund, Andras Perl, Joseph Horvath, Stephen D Jett, Peter G Medveczky

Abstract read
In one paragraph

Article in Leukemia research, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.6field-weighted citation impact, top 29% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 7 citations in OpenAlex.

  1. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 4 institutions in 1 country.

Felipe BedoyaDepartment of Molecular Medicine, College of Medicine, University of South Florida, Tampa, FL 33612, United States.
Maria M Medveczky
Troy C Lund
Andras Perl
Joseph Horvath
Stephen D Jett
Peter G Medveczky
University of South Florida · USState University of New York · USUniversity of Minnesota · USUniversity of New Mexico · US

Funding

MODULATION OF ONCOGENIC AGENTS BY MARIJUANAR01CA111196 · NCI · UNIVERSITY OF SOUTH FLORIDA · PI MEDVECZKY, PETER GABOR · 2006 to 2010
$1.2M
NCI NIH HHS R01 CA111196NCI NIH HHS R01CA111196
6 · The paper itself

Abstract

Since most oncogenic viruses persist as extrachromosomal covalently closed circular DNA (cccDNA) in tumor cells, we developed an assay to visualize and identify cccDNA in primary lymphomas. We identified concatemers of the mitochondrial genome in all samples analyzed, but not in normal lymphocytes. One AIDS-associated lymphoma (EL) was further studied in detail as its mitochondrial genome consisted of tandem head-to-tail duplications. Insertion of C-residues was noted near the origin of replication of EL mtDNA. EL cells responded weakly to Fas-apoptotic stimulus, displayed reduced mitochondrial activity and mass, and produced higher levels of reactive oxygen intermediates. Screening of several AIDS-associated lymphomas and established lymphoid cell lines also revealed the presence of mitochondrial genome concatemers consisting of interlinked monomer molecules. Taken together, our results suggest that formation of mtDNA concatemers is associated with oncogenic transformation in lymphoid cells.

Indexed as

Base SequenceCell Line, TumorDNA, MitochondrialDNA PrimersHumansLymphoma, AIDS-RelatedMicroscopy, ElectronPolymerase Chain ReactionDNA, MitochondrialDNA Primers

Identifiers

PMID19362738
PMCPMC2730422
OpenAlexW2170694570

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.