Evidence map›Paper›PMID 19362464›Full record

ReviewCurrent opinion in structural biology2009

Toward a structural understanding of IRES RNA function.

Megan E Filbin, Jeffrey S Kieft

Abstract readReview
In one paragraph

Review in Current opinion in structural biology, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 135 papers.

0numbers the graph read from it
0cells of the map it votes in
135citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

135 citing papers in PubMed.

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  17. Circular RNA: An emerging frontier in RNA therapeutic targets, RNA therapeutics, and mRNA vaccines.Journal of controlled release : official journal of the Controlled Release Society · 2022
    Review
  18. Article
  19. Review
  20. Review

75 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors.

Megan E FilbinDepartment of Biochemistry and Molecular Genetics, University of Colorado Denver School of Medicine, Mail Stop 8101, PO Box 6511, Aurora, CO 80045, USA.
Jeffrey S Kieft

Funding

Structural basis of protein synthesis by the hepatitis C virus IRES RNAR01GM081346 · NIGMS · UNIVERSITY OF COLORADO DENVER · PI KIEFT, JEFFREY S · 2008 to 2016
$2.0M
Structural and biophysical analysis of a viral IRESR01GM072560 · NIGMS · UNIVERSITY OF COLORADO DENVER · PI KIEFT, JEFFREY S · 2005 to 2009
$1.4M
NIGMS NIH HHS R01 GM072560NIGMS NIH HHS R01GM072560NIGMS NIH HHS R01 GM081346NIGMS NIH HHS R01GM081346
6 · The paper itself

Abstract

Protein synthesis of an RNA template can start by two different known mechanisms: cap-dependent translation initiation and cap-independent translation initiation. The latter is driven by RNA sequences called internal ribosome entry sites (IRESs) that are found in both viral RNAs and cellular mRNAs. The diverse mechanisms used by IRESs are reflected in their structural diversity, and this structural diversity challenges us to develop a cohesive model linking IRES function to structure. With more direct structural information available for the viral IRESs, data suggest an inverse correlation between the degree to which an IRES RNA can form a stable structure on its own and the number of factors that it requires to function. Lessons learned from the viral IRESs may help understand the cellular IRESs, although more structural data are needed before any strong links can be made.

Indexed as

AnimalsBase SequenceHumansMolecular Sequence DataRibosomal ProteinsRNAViral ProteinsRibosomal ProteinsRNAViral Proteins

Identifiers

PMID19362464
PMCPMC2757110

What OpenQuestion holds

Textmetadata
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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.