Evidence map›Paper›PMID 19357088›Full record

ArticleThe Plant cell2009

Suppression of repeat-mediated gross mitochondrial genome rearrangements by RecA in the moss Physcomitrella patens.

Masaki Odahara, Haruko Kuroiwa, Tsuneyoshi Kuroiwa, Yasuhiko Sekine

Open access · bronzeAbstract read
In one paragraph

Article in The Plant cell, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 27 papers.

0numbers the graph read from it
0cells of the map it votes in
27citing papers in PubMed
2.2field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

27 citing papers in PubMed, 52 citations in OpenAlex.

  1. Article
  2. WHIRLY protein functions in plants.Food and energy security · 2023
    Review
  3. Chloroplastic RecA protein fromPhysiology and molecular biology of plants : an international journal of functional plant biology · 2022
    Article
  4. Article
  5. The complete chloroplast genome ofMitochondrial DNA. Part B, Resources · 2022
    Article
  6. The complete chloroplast genome ofMitochondrial DNA. Part B, Resources · 2022
    Article
  7. The complete chloroplast genome ofMitochondrial DNA. Part B, Resources · 2022
    Article
  8. Article
  9. Review
  10. Article
  11. Article
  12. Factors Affecting Organelle Genome Stability inPlants (Basel, Switzerland) · 2020
    Review
  13. Article
  14. Review
  15. Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Masaki OdaharaDepartment of Life Science, College of Science, Rikkyo (St. Paul's) University, Toshima-ku, Tokyo 171-8501, Japan.
Haruko Kuroiwa
Tsuneyoshi Kuroiwa
Yasuhiko Sekine
Rikkyo University · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

RecA and its ubiquitous homologs are crucial components in homologous recombination. Besides their eukaryotic nuclear counterparts, plants characteristically possess several bacterial-type RecA proteins localized to chloroplasts and/or mitochondria, but their roles are poorly understood. Here, we analyzed the role of the only mitochondrial RecA in the moss Physcomitrella patens. Disruption of the P. patens mitochondrial recA gene RECA1 caused serious defects in plant growth and development and abnormal mitochondrial morphology. Analyses of mitochondrial DNA in disruptants revealed that frequent DNA rearrangements occurred at multiple loci. Structural analysis suggests that the rearrangements, which in some cases were associated with partial deletions and amplifications of mitochondrial DNA, were due to aberrant recombination between short (<100 bp) direct and inverted repeats in which the sequences were not always identical. Such repeats are abundant in the mitochondrial genome, and interestingly many are located in group II introns. These results suggest that RECA1 does not promote but rather suppresses recombination among short repeats scattered throughout the mitochondrial genome, thereby maintaining mitochondrial genome stability. We propose that RecA-mediated homologous recombination plays a crucial role in suppression of short repeat-mediated genome rearrangements in plant mitochondria.

Indexed as

Gene RearrangementGenome, MitochondrialBase SequenceBryopsidaDNA, ComplementaryDNA, MitochondrialMitochondriaMolecular Sequence DataPlant ProteinsRec A RecombinasesSequence AlignmentSequence DeletionDNA, ComplementaryDNA, MitochondrialPlant ProteinsRec A Recombinases

Identifiers

PMID19357088
PMCPMC2685630
OpenAlexW2141811823

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.