Evidence map›Paper›PMID 19348429›Full record

ArticleBiochemistry2009

Modulation of molecular interactions and function by rhodopsin palmitylation.

Paul S-H Park, K Tanuj Sapra, Beata Jastrzebska, Tadao Maeda, Akiko Maeda, Wojciech Pulawski, Masahiro Kono, Janis Lem, Rosalie K Crouch, Slawomir Filipek and 2 more

Open access · greenAbstract read
In one paragraph

Article in Biochemistry, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers.

0numbers the graph read from it
0cells of the map it votes in
22citing papers in PubMed
1.5field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

22 citing papers in PubMed, 32 citations in OpenAlex.

  1. Review
  2. Review
  3. Review
  4. Rhodopsin as a Molecular Target to Mitigate Retinitis Pigmentosa.Advances in experimental medicine and biology · 2022
    Review
  5. Article
  6. Lipid Modifications in Cilia Biology.Journal of clinical medicine · 2019
    Review
  7. Article
  8. Article
  9. Article
  10. Photocyclic behavior of rhodopsin induced by an atypical isomerization mechanism.Proceedings of the National Academy of Sciences of the United States of America · 2017
    Article
  11. Article
  12. Article
  13. Dynamic single-molecule force spectroscopy of rhodopsin in native membranes.Methods in molecular biology (Clifton, N.J.) · 2015
    Article
  14. Review
  15. Article
  16. Article
  17. Article
  18. Article
  19. Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 5 institutions in 3 countries.

Paul S-H ParkDepartment of Ophthalmology and Visual Sciences, Case Western Reserve University, Cleveland, Ohio 44106, USA. paul.park@case.edu
K Tanuj Sapra
Beata Jastrzebska
Tadao Maeda
Akiko Maeda
Wojciech Pulawski
Masahiro Kono
Janis Lem
Rosalie K Crouch
Slawomir Filipek
Daniel J Müller
Krzysztof Palczewski
Case Western Reserve University · USInternational Institute of Molecular and Cell Biology · PLMedical University of South Carolina · USTU Dresden · DETufts Medical Center · US

Funding

TISSUE CULTURE AND HYBRIDOMA MODULEP30EY011373 · NEI · CASE WESTERN RESERVE UNIVERSITY · PI Irina A Pikuleva · 1997 to 2026
$17.7M
STRUCTURAL STUDIES OF ARRESTINSR01EY009339 · NEI · UNIVERSITY OF WASHINGTON · PI KISER, PHILIP DAVID, PALCZEWSKI, KRZYSZTOF · 1992 to 2025
$16.0M
SYNTHETIC RETINAL PIGMENTS AND BINDING PROTEINSR01EY004939 · NEI · MEDICAL UNIVERSITY OF SOUTH CAROLINA · PI CROUCH, ROSALIE K · 1985 to 2011
$4.2M
RHODOPSIN MUTANTSR01EY012008 · NEI · TUFTS MEDICAL CENTER · PI LEM GEE, JANIS · 1998 to 2010
$4.1M
STRUCTURAL STUDIES OF G PROTEIN-COUPLED RECEPTORSR01GM079191 · NIGMS · CASE WESTERN RESERVE UNIVERSITY · PI PALCZEWSKI, KRZYSZTOF · 2007 to 2010
$845k
Towards a structural and temporal understanding of phototransductionR00EY018085 · NEI · CASE WESTERN RESERVE UNIVERSITY · PI PARK, PAUL S · 2008 to 2010
$825k
Towards a structural and temporal understanding of phototransductionK99EY018085 · NEI · CASE WESTERN RESERVE UNIVERSITY · PI PARK, PAUL S · 2007 to 2008
$194k
NEI NIH HHS EY004939NEI NIH HHS EY018085NEI NIH HHS EY09339NEI NIH HHS EY11373NEI NIH HHS EY12008NEI NIH HHS K99 EY018085NEI NIH HHS P30 EY011373NEI NIH HHS R00 EY018085NEI NIH HHS R01 EY004939NEI NIH HHS R01 EY009339NEI NIH HHS R01 EY012008NIGMS NIH HHS GM079191NIGMS NIH HHS R01 GM079191
6 · The paper itself

Abstract

Rhodopsin is palmitylated at two cysteine residues in its carboxyl terminal region. We have looked at the effects of palmitylation on the molecular interactions formed by rhodopsin using single-molecule force spectroscopy and the function of rhodopsin using both in vitro and in vivo approaches. A knockin mouse model expressing palmitate-deficient rhodopsin was used for live animal in vivo studies and to obtain native tissue samples for in vitro assays. We specifically looked at the effects of palmitylation on the chromophore-binding pocket, interactions of rhodopsin with transducin, and molecular interactions stabilizing the receptor structure. The structure of rhodopsin is largely unperturbed by the absence of palmitate linkage. The binding pocket for the chromophore 11-cis-retinal is minimally altered as palmitate-deficient rhodopsin exhibited the same absorbance spectrum as wild-type rhodopsin. Similarly, the rate of release of all-trans-retinal after light activation was the same both in the presence and absence of palmitylation. Significant differences were observed in the rate of transducin activation by rhodopsin and in the force required to unfold the last stable structural segment in rhodopsin at its carboxyl terminal end. A 1.3-fold reduction in the rate of transducin activation by rhodopsin was observed in the absence of palmitylation. Single-molecule force spectroscopy revealed a 2.1-fold reduction in the normalized force required to unfold the carboxyl terminal end of rhodopsin. The absence of palmitylation in rhodopsin therefore destabilizes the molecular interactions formed in the carboxyl terminal end of the receptor, which appears to hinder the activation of transducin by light-activated rhodopsin.

Indexed as

AnimalsChlorocebus aethiopsCOS CellsCysteineLightMiceMice, Inbred C57BLModels, MolecularMolecular ConformationPalmitic AcidProtein BindingProtein Structure, TertiaryRhodopsinRod Cell Outer SegmentTransducinCysteinePalmitic AcidRhodopsinTransducin

Identifiers

PMID19348429
PMCPMC2710298
OpenAlexW2150515284

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.