Evidence map›Paper›PMID 19347956›Full record

ArticleDevelopmental dynamics : an official publication of the American Association of Anatomists2009

CDK9/cyclin complexes modulate endoderm induction by direct interaction with Mix.3/mixer.

Haiqing Zhu, Joanne R Doherty, Emin Kuliyev, Paul E Mead

Open access · greenAbstract read
In one paragraph

Article in Developmental dynamics : an official publication of the American Association of Anatomists, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.5field-weighted citation impact, top 34% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 8 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. P-TEFb- the final frontier.Cell division · 2009
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Haiqing ZhuDepartment of Pathology, St Jude Children's Research Hospital, Memphis, Tennessee, USA.
Joanne R Doherty
Emin Kuliyev
Paul E Mead
St. Jude Children's Research Hospital · US

Funding

Viral Vector Technology (VVTSR)P30CA021765 · NCI · ST. JUDE CHILDREN'S RESEARCH HOSPITAL · PI CHARLES ROBERTS · 1985 to 2026
$166.9M
NCI NIH HHS NCI P30 CA21765NCI NIH HHS P30 CA021765
6 · The paper itself

Abstract

Mix-related homeodomain proteins are involved in endoderm formation in the early vertebrate embryo. We used a yeast two-hybrid screen to identify proteins that interact with Mix.3/mixer to regulate endoderm induction. We demonstrate that cyclin-dependent kinase 9 (CDK9) interacts with the carboxyl terminal domain of Mix.3. CDK9 is the catalytic subunit of the PTEF-b transcription elongation complex that phosphorylates the C-terminal domain of RNA polymerase II to promote efficient elongation of nascent transcripts. Using whole embryo transcription reporter and animal pole explant assays, we show that Mix.3 activity is regulated by CDK9/cyclin complexes. Co-expression of cyclin T2 and cyclin K had different effects on Mix.3 transcriptional activity and endoderm induction. Our data suggest that binding of CDK9, and the recruitment of different cyclin partners, can modulate the endoderm-inducing activity of Mix.3 during embryonic development. Developmental Dynamics 238:1346-1357, 2009. (c) 2009 Wiley-Liss, Inc.

Indexed as

Embryonic InductionAmino Acid SequenceAnimalsBrachyury ProteinCyclin-Dependent Kinase 9CyclinsEndodermFetal ProteinsGenes, ReporterHomeodomain ProteinsIn Situ HybridizationMolecular Sequence DataProtein BindingProtein IsoformsT-Box Domain ProteinsTranscription FactorsBrachyury ProteinCyclin-Dependent Kinase 9CyclinsFetal ProteinsHomeodomain Proteinsmixer protein, XenopusProtein IsoformsT-Box Domain ProteinsTranscription FactorsXenopus Proteins

Identifiers

PMID19347956
PMCPMC2832930
OpenAlexW2040699345

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.