Evidence map›Paper›PMID 19347017›Full record

ArticleModern pathology : an official journal of the United States and Canadian Academy of Pathology, Inc2009

Use of similar immunoglobulin VH gene segments by MALT lymphomas of the ocular adnexa.

David W Bahler, Philippe Szankasi, Sucheta Kulkarni, Raymond R Tubbs, James R Cook, Steven H Swerdlow

Open access · greenAbstract read
In one paragraph

Article in Modern pathology : an official journal of the United States and Canadian Academy of Pathology, Inc, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
2.2field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 29 citations in OpenAlex.

  1. Article
  2. Review
  3. Review
  4. NovelHaematologica · 2018
    Article
  5. Clinical aspects of malt lymphomas.Current hematologic malignancy reports · 2014
    Review
  6. Article
  7. Article
  8. Molecular pathology of lymphoma.Eye (London, England) · 2013
    Review
  9. Article
  10. Article
  11. Article
  12. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 1 country.

David W BahlerDepartment of Pathology, University of Utah, Salt Lake City, UT 84112, USA. david.bahler@path.utah.edu
Philippe Szankasi
Sucheta Kulkarni
Raymond R Tubbs
James R Cook
Steven H Swerdlow
Cleveland Clinic · USUniversity of Utah · USUniversity of Pittsburgh · US

Funding

Sjogren's Syndrome Associated B-cell lymphomagenesisR21DE017136 · NIDCR · UNIVERSITY OF UTAH · PI BAHLER, DAVID W · 2008 to 2009
$389k
NIDCR NIH HHS R21 DE017136
6 · The paper itself

Abstract

Extranodal marginal zone lymphomas of mucosa-associated lymphoid tissue type (MALT lymphomas) develop from acquired reactive infiltrates directed against external or autoantigens. Although some European cases of ocular adnexal MALT lymphoma have been associated with Chlamydia psittaci infections, C. psittaci has not been detected in large studies of US-based cases. To evaluate whether the growth of US-based ocular adnexal MALT lymphomas may be promoted by a similar antigen, we identified and analyzed the expressed immunoglobulin VH genes in 10 cases. Interestingly, the VH genes in two cases used the same VH1 family V1-2 gene segment, and three cases used the same VH4 family V4-34 gene segment. The other five cases all used different gene segments V4-31, V5-51, V3-23, V3-30, and V3-7. All of the VH genes were mutated from germ line, with percent homologies ranging between 96.9 and 89.0%. The distribution of replacement and silent mutations within the VH genes was nonrandom consistent with the maintenance of immunoglobulin function and also strongly suggestive of antigen selection in the six VH genes with highest mutation loads. The CDR3 sequences in two of three VH-34 cases were the same size (15 amino acids) and had similar sizes in the two VH1-2 cases (18 and 16 amino acids). In conclusion, US-based MALT lymphomas of the ocular adnexa preferentially express a limited set of VH gene segments not frequently used by other MALT lymphomas and consistent with some recognizing similar antigens. Analysis of somatic mutations present within the VH genes is also consistent with antigen binding stimulating the growth of these lymphomas.

Indexed as

Genes, Immunoglobulin Heavy ChainAdultAgedAged, 80 and overConjunctival NeoplasmsFemaleHumansImmunoglobulin Variable RegionLymphoma, B-Cell, Marginal ZoneMaleMiddle AgedMutationPolymerase Chain ReactionImmunoglobulin Variable Region

Identifiers

PMID19347017
PMCPMC2723997
OpenAlexW1986385380

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.