Evidence map›Paper›PMID 19346349›Full record

ArticleApplied and environmental microbiology2009

Phenotypic diversity of infectious red sea bream iridovirus isolates from cultured fish in Japan.

Hajime Shinmoto, Ken Taniguchi, Takuya Ikawa, Kenji Kawai, Syun-ichirou Oshima

Abstract read
In one paragraph

Article in Applied and environmental microbiology, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
1.8field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 49 citations in OpenAlex.

  1. Immunological Responses and Protection in the Largemouth Bass (Animals : an open access journal from MDPI · 2025
    Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Genotypic Characterization ofTransboundary and emerging diseases · 2023
    Article
  7. Article
  8. Review
  9. Article
  10. Megalocytiviruses.Viruses · 2012
    Review
  11. Article
  12. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Hajime ShinmotoKochi University, Nankoku, Japan.
Ken Taniguchi
Takuya Ikawa
Kenji Kawai
Syun-ichirou Oshima
Kōchi University · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Megalocytivirus is causing economically serious mass mortality by infecting fish in and around the Pacific region of Asia. The recent emergence of many new iridoviruses has drawn attention to the marked taxonomic variation within this virus family. Most studies of these viruses have not included extensive study of these emergent species. We explored the emergence of red sea bream iridovirus (RSIV) on a fish farm in Japan, and we specifically endeavored to quantify genetic and phenotypic differences between RSIV isolates using in vitro and in vivo methods. The three isolates had identical major capsid protein sequences, and they were closely related to Korean RSIV isolates. In vitro studies revealed that the isolates differed in replication rate, which was determined by real-time quantitative PCR of viral genomes in infected cells and cell culture supernatant, and in cell viability, estimated by the MTT (3-[4,5-dimethylthiazol-2-yl]-2,5-diphenyltetrazolium bromide) assay for infected cells. In vivo studies showed that the isolates exhibit different virulence characteristics: infected red sea bream showed either acute death or subacute death according to infection with different isolates. Significant differences were seen in the antigenicity of isolates by a formalin-inactivated vaccine test. These results revealed that variant characteristics exist in the same phylogenetic location in emergent iridoviruses. We suggest that this strain variation would expand the host range in iridoviral epidemics.

Indexed as

AnimalsCapsid ProteinsCells, CulturedCell SurvivalCluster AnalysisDNA, ViralDNA Virus InfectionsFishesIridovirusJapanMolecular Sequence DataPhylogenySequence Analysis, DNASequence Homology, Amino AcidSurvival AnalysisTetrazolium SaltsCapsid ProteinsDNA, ViralTetrazolium SaltsThiazolesthiazolyl blueVaccines, InactivatedViral Vaccines

Identifiers

PMID19346349
PMCPMC2687316
OpenAlexW2081047633

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.