Evidence map›Paper›PMID 19344680›Full record

ReviewBiochimica et biophysica acta2009

Transcriptional control of the tumor- and hypoxia-marker carbonic anhydrase 9: A one transcription factor (HIF-1) show?

Stefan Kaluz, Milota Kaluzová, Shu-Yuan Liao, Michael Lerman, Eric J Stanbridge

Open access · greenAbstract readReview
In one paragraph

Review in Biochimica et biophysica acta, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 130 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
130citing papers in PubMed, 2 pooled it
6.9field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

130 citing papers in PubMed, 2 syntheses or guidelines pooled it, 245 citations in OpenAlex.

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70 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Stefan KaluzDepartment of Microbiology and Molecular Genetics, University of California, Irvine, CA 92697-4025, USA. skaluz@emory.edu
Milota Kaluzová
Shu-Yuan Liao
Michael Lerman
Eric J Stanbridge
University of California, Irvine · USFrederick National Laboratory for Cancer Research · US

Funding

Single Cell Analysis of Cross Talk Among Kinase PathwaysR01CA104214 · NCI · UNIVERSITY OF CALIFORNIA-IRVINE · PI KALUZ, STEFAN · 2005 to 2008
$1.4M
NCI NIH HHS R01 CA104214
6 · The paper itself

Abstract

Transcriptional activation by hypoxia is mediated by the hypoxia-inducible factor (HIF) via binding to the hypoxia-responsive element (HRE). Hypoxia in solid tumors associates with poorer outcome of the disease and reliable cellular markers of tumor hypoxia would represent a valuable diagnostic marker and a potential therapeutic target. In this category, carbonic anhydrase IX (CAIX) is one of the most promising candidates. Here, we summarize the knowledge about transcriptional regulation of CA9. The HRE is the central regulatory element in the CA9 promoter, whereas other elements are limited to lesser roles of amplification of signals received at the HRE. The analysis of known mechanisms of activation of CA9 reveals the prominent role of the HIF-1 pathway. Experimental paradigms with uncoupled HIF-1alpha stability and transcriptional activity (pericellular hypoxia, proteasomal inhibitor) provide evidence that CA9 expression monitors transcriptional activity of HIF-1, rather than the abundance of HIF-1alpha. Furthermore, these paradigms could provide a corollary to some of the apparently discordant cases (CAIX+, HIF-1alpha-) or (CAIX-, HIF-1alpha+) observed in vivo. In conclusion, the existing data support the notion that CA9, due to the unique structure of its promoter, is one of the most sensitive endogenous sensors of HIF-1 activity.

Indexed as

Cell HypoxiaGene Expression Regulation, EnzymologicAntigens, NeoplasmBase SequenceBiomarkersBiomarkers, TumorCarbonic Anhydrase IXCarbonic AnhydrasesEpigenesis, GeneticHumansHypoxia-Inducible Factor 1Molecular Sequence DataNeoplasmsPromoter Regions, GeneticResponse ElementsTranscription, GeneticAntigens, NeoplasmBiomarkersBiomarkers, TumorCA9 protein, humanCarbonic Anhydrase IXCarbonic AnhydrasesHypoxia-Inducible Factor 1Tumor Suppressor Protein p53

Identifiers

PMID19344680
PMCPMC2670353
OpenAlexW2088474340

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.