Evidence map›Paper›PMID 19343204›Full record

ArticlePLoS genetics2009

Conserved alternative splicing and expression patterns of arthropod N-cadherin.

Shu-Ning Hsu, Shinichi Yonekura, Chun-Yuan Ting, Hugh M Robertson, Youichi Iwai, Tadashi Uemura, Chi-Hon Lee, Akira Chiba

Open access · goldAbstract read
In one paragraph

Article in PLoS genetics, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
1.5field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 16 citations in OpenAlex.

  1. Article
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  3. Review
  4. Article
  5. Article
  6. Article
  7. Crystal structures of Drosophila N-cadherin ectodomain regions reveal a widely used class of Ca²+-free interdomain linkers.Proceedings of the National Academy of Sciences of the United States of America · 2012
    Article
  8. Review
  9. Review
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  11. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 6 institutions in 2 countries.

Shu-Ning HsuNeuroscience Program, University of Illinois, Urbana, Illinois, United States of America. shuningh@uci.edu
Shinichi Yonekura
Chun-Yuan Ting
Hugh M Robertson
Youichi Iwai
Tadashi Uemura
Chi-Hon Lee
Akira Chiba
National Institutes of Health · USUniversity of Illinois System · USEunice Kennedy Shriver National Institute of Child Health and Human Development · USKyoto University · JPRIKEN Center for Brain Science · JPUniversity of Illinois Urbana-Champaign · US

Funding

Cellular And Molecular Mechanism Of R7 Target SelectionZIAHD008748 · NICHD · EUNICE KENNEDY SHRIVER NATIONAL INSTITUTE OF CHILD HEALTH & HUMAN DEVELOPMENT · PI LEE, CHI-HON · 2009 to 2011
$1.1M
Cellular And Molecular Mechanism Of R7 Target SelectionZ01HD008748 · NICHD · EUNICE KENNEDY SHRIVER NATIONAL INSTITUTE OF CHILD HEALTH & HUMAN DEVELOPMENT · PI LEE, CHI-HON · 2002 to 2008
$693k
Intramural NIH HHS Z01 HD008748NICHD NIH HHS HD008748-03
6 · The paper itself

Abstract

Metazoan development requires complex mechanisms to generate cells with diverse function. Alternative splicing of pre-mRNA not only expands proteomic diversity but also provides a means to regulate tissue-specific molecular expression. The N-Cadherin gene in Drosophila contains three pairs of mutually-exclusive alternatively-spliced exons (MEs). However, no significant differences among the resulting protein isoforms have been successfully demonstrated in vivo. Furthermore, while the N-Cadherin gene products exhibit a complex spatiotemporal expression pattern within embryos, its underlying mechanisms and significance remain unknown. Here, we present results that suggest a critical role for alternative splicing in producing a crucial and reproducible complexity in the expression pattern of arthropod N-Cadherin. We demonstrate that the arthropod N-Cadherin gene has maintained the three sets of MEs for over 400 million years using in silico and in vivo approaches. Expression of isoforms derived from these MEs receives precise spatiotemporal control critical during development. Both Drosophila and Tribolium use ME-13a and ME-13b in "neural" and "mesodermal" splice variants, respectively. As proteins, either ME-13a- or ME-13b-containing isoform can cell-autonomously rescue the embryonic lethality caused by genetic loss of N-Cadherin. Ectopic muscle expression of either isoform beyond the time it normally ceases leads to paralysis and lethality. Together, our results offer an example of well-conserved alternative splicing increasing cellular diversity in metazoans.

Indexed as

Alternative SplicingEvolution, MolecularGene Expression Regulation, DevelopmentalAmino Acid SequenceAnimalsArthropodsCadherinsDrosophilaExonsInsect ProteinsPhylogenySequence AlignmentTriboliumCadherinsInsect Proteins

Identifiers

PMID19343204
PMCPMC2655722
OpenAlexW2069482958

What OpenQuestion holds

Textmetadata
LicenceCC0
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.