Evidence map›Paper›PMID 19343178›Full record

SynthesisPLoS genetics2009

Meta-analysis of genome-wide scans for human adult stature identifies novel Loci and associations with measures of skeletal frame size.

Nicole Soranzo, Fernando Rivadeneira, Usha Chinappen-Horsley, Ida Malkina, J Brent Richards, Naomi Hammond, Lisette Stolk, Alexandra Nica, Michael Inouye, Albert Hofman and 28 more

Open access · goldAbstract readMeta-AnalysisTwin Study
In one paragraph

Synthesis in PLoS genetics, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 159 papers, 14 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
159citing papers in PubMed, 14 pooled it
11.3field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

159 citing papers in PubMed, 14 syntheses or guidelines pooled it, 279 citations in OpenAlex.

  1. Sequence-based GWAS meta-analyses for beef production traits.Genetics, selection, evolution : GSE · 2023
    Pooled it
  2. Pooled it
  3. Pooled it
  4. Pooled it
  5. Pooled it
  6. Pooled it
  7. Pooled it
  8. Pooled it
  9. Pooled it
  10. Pooled it
  11. Pooled it
  12. Pooled it
  13. Pooled it
  14. Pooled it
  15. Trial
  16. Adhesion G protein-coupled receptors.Pharmacological reviews · 2026
    Review
  17. Genomic architecture of insertion-deletion (indel) variants in beetal goats of India.Mammalian genome : official journal of the International Mammalian Genome Society · 2026
    Article
  18. Article
  19. Article
  20. Polymorphism ofAnimal biotechnology · 2025
    Article

99 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

38 authors at 11 institutions in 4 countries.

Nicole SoranzoHuman Genetics Department, Wellcome Trust Sanger Institute, Hinxton, Cambridge, United Kingdom.
Fernando Rivadeneira
Usha Chinappen-Horsley
Ida Malkina
J Brent Richards
Naomi Hammond
Lisette Stolk
Alexandra Nica
Michael Inouye
Albert Hofman
Jonathan Stephens
Eleanor Wheeler
Pascal Arp
Rhian Gwilliam
P Mila Jhamai
Simon Potter
Amy Chaney
Mohammed J R Ghori
Radhi Ravindrarajah
Sergey Ermakov
Karol Estrada
Huibert A P Pols
Frances M Williams
Wendy L McArdle
Joyce B van Meurs
Ruth J F Loos
Emmanouil T Dermitzakis
Kourosh R Ahmadi
Deborah J Hart
Willem H Ouwehand
Nicholas J Wareham
Inês Barroso
Manjinder S Sandhu
David P Strachan
Gregory Livshits
Timothy D Spector
André G Uitterlinden
Panos Deloukas
Wellcome Sanger Institute · GBErasmus MC · NLKing's College London · GBTel Aviv University · ILAddenbrooke's Hospital · GBSt Thomas' Hospital · GBMcGill University · CANHS Blood and Transplant · GBSt George's, University of London · GBUniversity of Bristol · GBUniversity of Cambridge · GB

Funding

Medical Research Council G0000934Medical Research Council G0701863Medical Research Council MC_QA137934Medical Research Council MC_U106188470Wellcome TrustWellcome Trust 068545/Z/02
6 · The paper itself

Abstract

Recent genome-wide (GW) scans have identified several independent loci affecting human stature, but their contribution through the different skeletal components of height is still poorly understood. We carried out a genome-wide scan in 12,611 participants, followed by replication in an additional 7,187 individuals, and identified 17 genomic regions with GW-significant association with height. Of these, two are entirely novel (rs11809207 in CATSPER4, combined P-value = 6.1x10(-8) and rs910316 in TMED10, P-value = 1.4x10(-7)) and two had previously been described with weak statistical support (rs10472828 in NPR3, P-value = 3x10(-7) and rs849141 in JAZF1, P-value = 3.2x10(-11)). One locus (rs1182188 at GNA12) identifies the first height eQTL. We also assessed the contribution of height loci to the upper- (trunk) and lower-body (hip axis and femur) skeletal components of height. We find evidence for several loci associated with trunk length (including rs6570507 in GPR126, P-value = 4x10(-5) and rs6817306 in LCORL, P-value = 4x10(-4)), hip axis length (including rs6830062 at LCORL, P-value = 4.8x10(-4) and rs4911494 at UQCC, P-value = 1.9x10(-4)), and femur length (including rs710841 at PRKG2, P-value = 2.4x10(-5) and rs10946808 at HIST1H1D, P-value = 6.4x10(-6)). Finally, we used conditional analyses to explore a possible differential contribution of the height loci to these different skeletal size measurements. In addition to validating four novel loci controlling adult stature, our study represents the first effort to assess the contribution of genetic loci to three skeletal components of height. Further statistical tests in larger numbers of individuals will be required to verify if the height loci affect height preferentially through these subcomponents of height.

Indexed as

Body HeightGenome-Wide Association StudyPolymorphism, Single NucleotideAdolescentAdultAgedAged, 80 and overBone and BonesCohort StudiesFemaleHumansMaleMiddle AgedSkeletonWhite PeopleYoung Adult

Identifiers

PMID19343178
PMCPMC2661236
OpenAlexW2157507785

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.