Evidence map›Paper›PMID 19340454›Full record

ArticlePflugers Archiv : European journal of physiology2009

Ammonium ion transport by the AMT/Rh homolog TaAMT1;1 is stimulated by acidic pH.

Rikke Søgaard, Magnus Alsterfjord, Nanna Macaulay, Thomas Zeuthen

Abstract read
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In one paragraph

Article in Pflugers Archiv : European journal of physiology, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 25 papers.

0numbers the graph read from it
0cells of the map it votes in
25citing papers in PubMed
0.9field-weighted citation impact, top 27% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

25 citing papers in PubMed, 54 citations in OpenAlex.

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  7. Regulation of Cytosolic pH: The Contributions of Plant Plasma Membrane HInternational journal of molecular sciences · 2021
    Review
  8. Review
  9. Function and Regulation of Ammonium Transporters in Plants.International journal of molecular sciences · 2020
    Review
  10. Article
  11. Functional Characterization of theFrontiers in plant science · 2020
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Rikke SøgaardNordic Centre for Water Imbalance Related Disorders, Department of Cellular and Molecular Medicine, Blegdamsvej 3C, University of Copenhagen, Copenhagen, 2200 N, Denmark.
Magnus Alsterfjord
Nanna Macaulay
Thomas Zeuthen
University of Copenhagen · DK

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

It is unclear how ammonia is transported by proteins from the Amt/Mep/Rh superfamily. We investigated this for the ammonium transporter TaAMT1;1 from wheat expressed in Xenopus oocytes by two-electrode voltage clamp and radio-labeled uptakes. Inward currents were activated by NH (4) (+) or methylammonium ions (MeA(+)). Importantly, currents increased fivefold when the external pH was decreased from 7.4 to 5.5; this type of pH dependence is unique and is a strong indication of NH (4) (+) or MeA(+) transport. This was confirmed by the close correlation between the uptake of radio-labeled MeA(+) and MeA(+)-induced currents. Homology models of members of the Amt/Mep/Rh superfamily exhibited major divergences in their cytoplasmic regions. A point mutation in this region of TaAMT1;1 abolished the pH sensitivity and decreased the apparent affinities for NH (4) (+) and MeA(+). We suggest a model where NH (4) (+) is transported as NH(3) and H(+) via separate pathways but the latter two recombine before leaving the protein.

Indexed as

AnimalsBiological Transport, ActiveCation Transport ProteinsCell MembraneCells, CulturedHydrogen-Ion ConcentrationIon Channel GatingMembrane PotentialsOocytesPlant ProteinsQuaternary Ammonium CompoundsTriticumXenopus laevisammonium transporters, plantCation Transport ProteinsPlant ProteinsQuaternary Ammonium Compounds

Identifiers

PMID19340454
OpenAlexW1988639126

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.