Evidence map›Paper›PMID 19340300›Full record

ArticlePloS one2009

A functional screen for regulators of CKDN2A reveals MEOX2 as a transcriptional activator of INK4a.

Jeffrey T Irelan, Ana Gutierrez Del Arroyo, Abel Gutierrez, Gordon Peters, Kim C Quon, Loren Miraglia, Sumit K Chanda

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed
1.5field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed, 28 citations in OpenAlex.

  1. Review
  2. Loss of fragile WWOX gene leads to senescence escape and genome instability.Cellular and molecular life sciences : CMLS · 2023
    Article
  3. Article
  4. Article
  5. Article
  6. Review
  7. HMGA Genes and Proteins in Development and Evolution.International journal of molecular sciences · 2020
    Review
  8. AProceedings of the National Academy of Sciences of the United States of America · 2019
    Article
  9. Prognostic significance of MEOX2 in gliomas.Modern pathology : an official journal of the United States and Canadian Academy of Pathology, Inc · 2019
    Article
  10. Article
  11. Review
  12. Article
  13. Article
  14. Article
  15. Article
  16. Review
  17. Review
  18. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 1 institution in 1 country.

Jeffrey T IrelanGenomics Institute of the Novartis Research Foundation, San Diego, CA, USA. jirelan@gmail.com
Ana Gutierrez Del Arroyo
Abel Gutierrez
Gordon Peters
Kim C Quon
Loren Miraglia
Sumit K Chanda
Genomics Institute of the Novartis Research Foundation · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The CDKN2A locus encodes two important tumor suppressors, INK4a and ARF, which respond to oncogenic stresses by inducing cellular senescence. We conducted a genome-scale cDNA overexpression screen using a reporter containing INK4a regulatory sequences to identify novel transcriptional activators of this locus. This screen revealed 285 cDNAs that putatively regulate the transcriptional activation of INK4a. Of these, 56 are annotated as transcription factors, including two previously reported activators of the locus, ETS2 and JUNB. Fourteen genes were further validated for activity and specificity, including several homeodomain proteins. We found that the transcription of one of these, the homeodomain protein MEOX2 (GAX) is enhanced in primary cells during the induction of senescence, and forced expression of this protein results in the induction of premature senescence. We further demonstrate that MEOX2-induced senescence is dependent upon INK4a activity, and chromatin immunoprecipitation studies indicate that MEOX2 directly binds the INK4a promoter. These results support a role for this homeodomain protein as a direct regulator of INK4a transcription and senescence in human cells.

Indexed as

Base SequenceCells, CulturedCyclin-Dependent Kinase Inhibitor p16DNA, ComplementaryDNA PrimersHomeodomain ProteinsHumansReverse Transcriptase Polymerase Chain ReactionTrans-ActivatorsCyclin-Dependent Kinase Inhibitor p16DNA, ComplementaryDNA PrimersHomeodomain ProteinsMEOX2 protein, humanTrans-Activators

Identifiers

PMID19340300
PMCPMC2659797
OpenAlexW2046996819

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.