Evidence map›Paper›PMID 19337251›Full record

ArticleBritish journal of cancer2009

DNA copy number loss and allelic imbalance at 2p16 in lung cancer associated with asbestos exposure.

E Kettunen, M Aavikko, P Nymark, S Ruosaari, H Wikman, E Vanhala, K Salmenkivi, R Pirinen, A Karjalainen, E Kuosma and 1 more

Open access · hybridAbstract read
In one paragraph

Article in British journal of cancer, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
2.1field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 29 citations in OpenAlex.

  1. Review
  2. Article
  3. Review
  4. Asbestos, Smoking and Lung Cancer: An Update.International journal of environmental research and public health · 2019
    Review
  5. DNA Copy Number Variations as Markers of Mutagenic Impact.International journal of molecular sciences · 2019
    Review
  6. Article
  7. Article
  8. Article
  9. Arsenic, asbestos and radon: emerging players in lung tumorigenesis.Environmental health : a global access science source · 2012
    Review
  10. Genetic ecotoxicology of asbestos pollution in the house mouse Mus musculus domesticus.Environmental science and pollution research international · 2011
    Article
  11. Role of mutagenicity in asbestos fiber-induced carcinogenicity and other diseases.Journal of toxicology and environmental health. Part B, Critical reviews · 2011
    Review
  12. Pulmonary endpoints (lung carcinomas and asbestosis) following inhalation exposure to asbestos.Journal of toxicology and environmental health. Part B, Critical reviews · 2011
    Review
  13. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 5 institutions in 2 countries.

E KettunenHealth and Work Ability, Finnish Institute of Occupational Health, Helsinki, Finland. eeva.kettunen@ttl.fi
M Aavikko
P Nymark
S Ruosaari
H Wikman
E Vanhala
K Salmenkivi
R Pirinen
A Karjalainen
E Kuosma
S Anttila
Finnish Institute of Occupational Health · FIHelsinki University Hospital · FIKuopio University Hospital · FIUniversity Medical Center Hamburg-Eppendorf · DEUniversity of Helsinki · FI

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Five to seven percent of lung tumours are estimated to occur because of occupational asbestos exposure. Using cDNA microarrays, we have earlier detected asbestos exposure-related genomic regions in lung cancer. The region at 2p was one of those that differed most between asbestos-exposed and non-exposed patients. Now, we evaluated genomic alterations at 2p22.1-p16.1 as a possible marker for asbestos exposure. Lung tumours from 205 patients with pulmonary asbestos fibre counts from 0 to 570 million fibres per gram of dry lung, were studied by fluorescence in situ hybridisation (FISH) for DNA copy number alterations (CNA). The prevalence of loss at 2p16, shown by three different FISH probes, was significantly increased in lung tumours of asbestos-exposed patients compared with non-exposed (P=0.05). In addition, a low copy number loss at 2p16 associated significantly with high-level asbestos exposure (P=0.02). Furthermore, 27 of the tumours were studied for allelic imbalances (AI) at 2p22.1-p16.1 using 14 microsatellite markers and also AI at 2p16 was related to asbestos exposure (P=0.003). Our results suggest that alterations at 2p16 combined with other markers could be useful in diagnosing asbestos-related lung cancer.

Indexed as

Chromosomes, Human, Pair 2AdultAgedAged, 80 and overAllelic ImbalanceAsbestosChromosome MappingDNA, NeoplasmFemaleGenetic MarkersHumansIn Situ Hybridization, FluorescenceLung NeoplasmsMaleMicrosatellite RepeatsMiddle AgedAsbestosDNA, NeoplasmGenetic Markers

Identifiers

PMID19337251
PMCPMC2676554
OpenAlexW2079480494

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.