Evidence map›Paper›PMID 19336559›Full record

Trial reportCancer epidemiology, biomarkers & prevention : a publication of the American Association for Cancer Research, cosponsored by the American Society of Preventive Oncology2009

Global DNA hypomethylation (LINE-1) in the normal colon and lifestyle characteristics and dietary and genetic factors.

Jane C Figueiredo, Maria V Grau, Kristin Wallace, A Joan Levine, Lanlan Shen, Randala Hamdan, Xinli Chen, Robert S Bresalier, Gail McKeown-Eyssen, Robert W Haile and 2 more

Open access · bronzeAbstract readMulticenter StudyRandomized Controlled Trial
In one paragraph

Trial report in Cancer epidemiology, biomarkers & prevention : a publication of the American Association for Cancer Research, cosponsored by the American Society of Preventive Oncology, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 84 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
84citing papers in PubMed, 1 pooled it
9.1field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

84 citing papers in PubMed, 1 synthesis or guideline pooled it, 145 citations in OpenAlex.

  1. Epigenetics and human obesity.International journal of obesity (2005) · 2015
    Pooled it
  2. Trial
  3. Trial
  4. Trial
  5. Trial
  6. Trial
  7. Trial
  8. Trial
  9. Trial
  10. Article
  11. Review
  12. Article
  13. Article
  14. Review
  15. Review
  16. Article
  17. Article
  18. Article
  19. Article
  20. Article

24 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 4 institutions in 2 countries.

Jane C FigueiredoDepartment of Preventive Medicine, Keck School of Medicine, University of Southern California, Los Angeles, CA 90033, USA. janefigu@usc.edu
Maria V Grau
Kristin Wallace
A Joan Levine
Lanlan Shen
Randala Hamdan
Xinli Chen
Robert S Bresalier
Gail McKeown-Eyssen
Robert W Haile
John A Baron
Jean-Pierre J Issa
Dartmouth College · USUniversity of Southern California · USThe University of Texas MD Anderson Cancer Center · USUniversity of Toronto · CA

Funding

FOLATE, DNA METHYLATION AND CARCINOGENESIS IN THE BOWELR01CA059005 · NCI · UNIV OF NORTH CAROLINA CHAPEL HILL · PI BARON, JOHN ANTHONY · 1993 to 2013
$17.3M
Folate, 1-Carbon Nutrients, Gene Variants &Colon CancerU54CA100971 · NCI · HARVARD UNIVERSITY (SCH OF PUBLIC HLTH) · PI HUNTER, DAVID JOHN · 2003 to 2008
$7.0M
Diet and DNA methylation in colon mucosa and adenomasR01CA105346 · NCI · UNIVERSITY OF TX MD ANDERSON CAN CTR · PI ISSA, JEAN-PIERRE J · 2004 to 2007
$1.1M
NCI NIH HHS R01 CA059005NCI NIH HHS R01-CA-059005NCI NIH HHS R01 CA105346NCI NIH HHS R01-CA-105346NCI NIH HHS U54 CA100971NCI NIH HHS U54-CA-100971
6 · The paper itself

Abstract

backgroundGlobal loss of methylated cytosines in DNA, thought to predispose to chromosomal instability and aneuploidy, has been associated with an increased risk of colorectal neoplasia. Little is known about the relationships between global hypomethylation and lifestyle, demographics, dietary measures, and genetic factors.

methodsOur data were collected as part of a randomized clinical trial testing the efficacy of aspirin and folic acid for the prevention of colorectal adenomas. At a surveillance colonoscopy approximately 3 years after the qualifying exam, we obtained two biopsies of the normal-appearing mucosa from the right colon and two biopsies from the left colon. Specimens were assayed for global hypomethylation using a pyrosequencing assay for LINE-1 (long interspersed nucleotide elements) repeats.

resultsThe analysis included data from 388 subjects. There was relatively little variability in LINE methylation overall. Mean LINE-1 methylation levels in normal mucosa from the right bowel were significantly lower than those on the left side (P < 0.0001). No significant associations were found between LINE-1 methylation and folate treatment, age, sex, body mass index, smoking status, alcohol use, dietary intake, or circulating levels of B vitamins, homocysteine, or selected genotypes. Race, dietary folic acid, and plasma B(6) showed associations with global methylation that differed between the right and the left bowel. The effect of folic acid on risk of adenomas did not differ according to extent of LINE-1 methylation, and we found no association between LINE-1 methylation and risk of adenomas.

conclusionsLINE-1 methylation is not influenced by folic acid supplementation but differs by colon subsite.

Indexed as

DietDNA MethylationAdenomaAlcohol DrinkingAspirinColonColonic PolypsColonoscopyColorectal NeoplasmsCpG IslandsDietary SupplementsDouble-Blind MethodFemaleFolic AcidFollow-Up StudiesHumansAspirinFolic AcidVitamin B 6

Identifiers

PMID19336559
PMCPMC2712652
OpenAlexW2101083042

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.