Evidence map›Paper›PMID 19332621›Full record

ArticleThe Journal of general physiology2009

State-dependent modulation of CFTR gating by pyrophosphate.

Ming-Feng Tsai, Hiroyasu Shimizu, Yoshiro Sohma, Min Li, Tzyh-Chang Hwang

Open access · bronzeAbstract readComparative Study
In one paragraph

Article in The Journal of general physiology, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 39 papers.

0numbers the graph read from it
0cells of the map it votes in
39citing papers in PubMed
4.5field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

39 citing papers in PubMed, 48 citations in OpenAlex.

  1. Article
  2. Article
  3. Pharmacological Responses of the G542X-CFTR to CFTR Modulators.Frontiers in molecular biosciences · 2022
    Article
  4. Article
  5. Review
  6. Article
  7. Article
  8. Article
  9. Structural mechanisms of CFTR function and dysfunction.The Journal of general physiology · 2018
    Review
  10. Article
  11. A common mechanism for CFTR potentiators.The Journal of general physiology · 2017
    Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Modulation of CFTR gating by permeant ions.The Journal of general physiology · 2015
    Article
  18. Article
  19. Article
  20. Vx-770 potentiates CFTR function by promoting decoupling between the gating cycle and ATP hydrolysis cycle.Proceedings of the National Academy of Sciences of the United States of America · 2013
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 4 institutions in 4 countries.

Ming-Feng TsaiDepartment of Medical Pharmacology and Physiology, University of Missouri-Columbia, Missouri 65211, USA.
Hiroyasu Shimizu
Yoshiro Sohma
Min Li
Tzyh-Chang Hwang
Czech Academy of Sciences, Institute of Physiology · CZMinistère de la Santé et de l'Hygiène Publique · MLOsaka Medical and Pharmaceutical University · JPUniversity of Missouri · US

Funding

MOLECULAR PATHOPHYSIOLOGY OF CYSTIC FIBROSISR01DK055835 · NIDDK · UNIVERSITY OF MISSOURI-COLUMBIA · PI HWANG, TZYH-CHANG · 1999 to 2022
$6.1M
MODEL OBSERVERS FOR COMPRESSION OF CORONARY ANGIOGRAMSR01HL053455 · NHLBI · UNIVERSITY OF CALIFORNIA SANTA BARBARA · PI ECKSTEIN, MIGUEL PATRICIO · 1996 to 2008
$1.7M
A Phase 1 Study/DNA-Based Vaccine vs Prostatic Acid PaseK23RR016489 · NCRR · UNIVERSITY OF WISCONSIN-MADISON · PI MCNEEL, DOUGLAS G · 2002 to 2006
$709k
NCRR NIH HHS C06 RR-016489-01NCRR NIH HHS K23 RR016489NHLBI NIH HHS R01 HL053455NHLBI NIH HHS R01HL53455NIDDK NIH HHS R01 DK055835NIDDK NIH HHS R01DK55835
6 · The paper itself

Abstract

Cystic fibrosis transmembrane conductance regulator (CFTR) is an adenosine triphosphate (ATP)-gated chloride channel. ATP-induced dimerization of CFTR's two nucleotide-binding domains (NBDs) has been shown to reflect the channel open state, whereas hydrolysis of ATP is associated with channel closure. Pyrophosphate (PPi), like nonhydrolytic ATP analogues, is known to lock open the CFTR channel for tens of seconds when applied with ATP. Here, we demonstrate that PPi by itself opens the CFTR channel in a Mg(2+)-dependent manner long after ATP is removed from the cytoplasmic side of excised membrane patches. However, the short-lived open state (tau approximately 1.5 s) induced by MgPPi suggests that MgPPi alone does not support a stable NBD dimer configuration. Surprisingly, MgPPi elicits long-lasting opening events (tau approximately 30 s) when administrated shortly after the closure of ATP-opened channels. These results indicate the presence of two different closed states (C(1) and C(2)) upon channel closure and a state-dependent effect of MgPPi on CFTR gating. The relative amount of channels entering MgPPi-induced long-open bursts during the ATP washout phase decreases over time, indicating a time-dependent dissipation of the closed state (C(2)) that can be locked open by MgPPi. The stability of the C(2) state is enhanced when the channel is initially opened by N(6)-phenylethyl-ATP, a high affinity ATP analogue, but attenuated by W401G mutation, which likely weakens ATP binding to NBD1, suggesting that an ATP molecule remains bound to the NBD1 site in the C(2) state. Taking advantage of the slow opening rate of Y1219G-CFTR, we are able to identify a C(2)-equivalent state (C(2)*), which exists before the channel in the C(1) state is opened by ATP. This closed state responds to MgPPi much more inefficiently than the C(2) state. Finally, we show that MgAMP-PNP exerts its effects on CFTR gating via a similar mechanism as MgPPi. The structural and functional significance of our findings is discussed.

Indexed as

Adenosine TriphosphateAnimalsCHO CellsCricetinaeCricetulusCystic Fibrosis Transmembrane Conductance RegulatorDiphosphatesHumansIon Channel GatingMagnesium CompoundsPatch-Clamp TechniquesProtein BindingAdenosine TriphosphateCystic Fibrosis Transmembrane Conductance RegulatorDiphosphatesMagnesium Compoundsmagnesium pyrophosphate

Identifiers

PMID19332621
PMCPMC2699106
OpenAlexW2041207269

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-SA
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.