Evidence map›Paper›PMID 19332430›Full record

ArticleThe journal of histochemistry and cytochemistry : official journal of the Histochemistry Society2009

Quantitative in situ detection of phosphoproteins in fixed tissues using quantum dot technology.

Juraj Bodo, Lisa Durkin, Eric D Hsi

Open access · bronzeAbstract read
In one paragraph

Article in The journal of histochemistry and cytochemistry : official journal of the Histochemistry Society, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
1.9field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 20 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Juraj BodoDepartment of Clinical Pathology, L-11 Cleveland Clinic, Cleveland, Ohio 44195, USA.
Lisa Durkin
Eric D Hsi
Cleveland Clinic · US

Funding

Characterization of Methods for Preservation of Phosphoproteins in fixed tissuesR21CA123006 · NCI · CLEVELAND CLINIC LERNER COM-CWRU · PI HSI, ERIC · 2006 to 2007
$377k
NCI NIH HHS R21CA123006
6 · The paper itself

Abstract

Detection and quantitation of phosphoproteins (PPs) in fixed tissues will become increasingly important as additional inhibitors of protein kinases enter clinical use and new disease entities are defined by molecular changes affecting PP levels. We characterize fixation conditions suitable for accurate PP quantitation that are achievable in a clinical laboratory and illustrate the utility of in situ quantitation of PPs by quantum dot (QD) nanocrystals in two models: (1) a therapeutic model demonstrating effects of a targeted therapeutic (quantitative reduction of phospho-GSK3beta) in xenografts treated with enzastaurin; and (2) a diagnostic model that identifies elevated levels of nuclear phospho-STAT5 in routine bone marrow biopsies from patients with acute myeloid leukemia based on the presence of the activating FLT3-ITD mutation. Finally, we document production of a well-characterized tissue microarray of widely available cell lines as a multilevel calibrator for validating numerous phosphoprotein assays. QD immunofluorescence is an ideal method for in situ quantitation of PPs in fixed samples, providing valuable cell type-specific and subcellular information about pathway activation in primary tissues.

Indexed as

AnimalsAntineoplastic AgentsBone MarrowCalibrationCell LineColonic NeoplasmsFixativesfms-Like Tyrosine Kinase 3FormaldehydeGlycogen Synthase Kinase 3Glycogen Synthase Kinase 3 betaHumansIndolesLeukemia, Myeloid, AcuteMiceMutationAntineoplastic AgentsenzastaurinFixativesFLT3 protein, humanfms-Like Tyrosine Kinase 3FormaldehydeGlycogen Synthase Kinase 3Glycogen Synthase Kinase 3 betaGSK3B protein, humanGsk3b protein, mouseIndolesPhosphoproteinsSTAT5 Transcription Factor

Identifiers

PMID19332430
PMCPMC2699325
OpenAlexW2121804282

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.