Evidence map›Paper›PMID 19323841›Full record

ArticleBMC molecular biology2009

Evidence of a tick RNAi pathway by comparative genomics and reverse genetics screen of targets with known loss-of-function phenotypes in Drosophila.

Sebastian Kurscheid, Ala E Lew-Tabor, Manuel Rodriguez Valle, Anthea G Bruyeres, Vivienne J Doogan, Ulrike G Munderloh, Felix D Guerrero, Roberto A Barrero, Matthew I Bellgard

Open access · hybridAbstract read
In one paragraph

Article in BMC molecular biology, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 35 papers.

0numbers the graph read from it
0cells of the map it votes in
35citing papers in PubMed
2.6field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

35 citing papers in PubMed, 80 citations in OpenAlex.

  1. Review
  2. Hl48 modulates argonaute 2 to enhance RNA interference in ticks.Frontiers in cellular and infection microbiology · 2026
    Article
  3. Review
  4. Ixodes ricinus as potential vector for Usutu virus.PLoS neglected tropical diseases · 2024
    Article
  5. RNA activation in ticks.Scientific reports · 2023
    Article
  6. Article
  7. Article
  8. Frontiers in cellular and infection microbiology · 2022
    Article
  9. Review
  10. Article
  11. Review
  12. Article
  13. Article
  14. Review
  15. Article
  16. Review
  17. Article
  18. Article
  19. Dendritic transport of tick-borne flavivirus RNA by neuronal granules affects development of neurological disease.Proceedings of the National Academy of Sciences of the United States of America · 2017
    Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 5 institutions in 2 countries.

Sebastian KurscheidCooperative Research Centre for Beef Genetic Technologies, Armidale, NSW, Australia. skurscheid@ccg.murdoch.edu.au
Ala E Lew-Tabor
Manuel Rodriguez Valle
Anthea G Bruyeres
Vivienne J Doogan
Ulrike G Munderloh
Felix D Guerrero
Roberto A Barrero
Matthew I Bellgard
Cooperative Research Centre for Beef Genetic Technologies · AUMurdoch University · AUNew South Wales Department of Primary Industries · AUKnipling-Bushland U.S. Livestock Insects Research Laboratory · USUniversity of Minnesota · US

Funding

Development of Paratransgenic Ticks for Disease ControlR01AI049424 · NIAID · UNIVERSITY OF MINNESOTA TWIN CITIES · PI MUNDERLOH, ULRIKE GERTRUD · 2002 to 2022
$6.9M
6 · The paper itself

Abstract

backgroundThe Arthropods are a diverse group of organisms including Chelicerata (ticks, mites, spiders), Crustacea (crabs, shrimps), and Insecta (flies, mosquitoes, beetles, silkworm). The cattle tick, Rhipicephalus (Boophilus) microplus, is an economically significant ectoparasite of cattle affecting cattle industries world wide. With the availability of sequence reads from the first Chelicerate genome project (the Ixodes scapularis tick) and extensive R. microplus ESTs, we investigated evidence for putative RNAi proteins and studied RNA interference in tick cell cultures and adult female ticks targeting Drosophila homologues with known cell viability phenotype.

resultsWe screened 13,643 R. microplus ESTs and I. scapularis genome reads to identify RNAi related proteins in ticks. Our analysis identified 31 RNAi proteins including a putative tick Dicer, RISC associated (Ago-2 and FMRp), RNA dependent RNA polymerase (EGO-1) and 23 homologues implicated in dsRNA uptake and processing. We selected 10 R. microplus ESTs with >80% similarity to D. melanogaster proteins associated with cell viability for RNAi functional screens in both BME26 R. microplus embryonic cells and female ticks in vivo. Only genes associated with proteasomes had an effect on cell viability in vitro. In vivo RNAi showed that 9 genes had significant effects either causing lethality or impairing egg laying.

conclusionWe have identified key RNAi-related proteins in ticks and along with our loss-of-function studies support a functional RNAi pathway in R. microplus. Our preliminary studies indicate that tick RNAi pathways may differ from that of other Arthropods such as insects.

Indexed as

PhenotypeRNA InterferenceAnimalsDrosophila melanogasterDrosophila ProteinsEukaryotic Initiation FactorsFemaleGenetic TestingGenomicsOvumPhylogenyProtein Structure, TertiaryRhipicephalusRibonuclease IIIRNA-Dependent RNA PolymeraseRNA, Double-StrandedDrosophila ProteinsEukaryotic Initiation FactorsRibonuclease IIIRNA-Dependent RNA PolymeraseRNA, Double-StrandedRNA-Induced Silencing Complex

Identifiers

PMID19323841
PMCPMC2676286
OpenAlexW2000354010

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.