Evidence map›Paper›PMID 19322777›Full record

ArticleProteomics2009

Proteomic analysis of cytoplasmic and surface proteins from yeast cells, hyphae, and biofilms of Candida albicans.

Montserrat Martínez-Gomariz, Palani Perumal, Satish Mekala, César Nombela, W LaJean Chaffin, Concha Gil

Open access · greenAbstract read
In one paragraph

Article in Proteomics, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 35 papers.

0numbers the graph read from it
0cells of the map it votes in
35citing papers in PubMed
3.0field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

35 citing papers in PubMed, 99 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Article
  5. Central Carbon Metabolism inJournal of fungi (Basel, Switzerland) · 2024
    Article
  6. Article
  7. Review
  8. Article
  9. Cell Surface Expression of Nrg1 Protein inJournal of fungi (Basel, Switzerland) · 2021
    Article
  10. Article
  11. Article
  12. Review
  13. Review
  14. Contributions of the Biofilm Matrix toJournal of fungi (Basel, Switzerland) · 2020
    Review
  15. Article
  16. Review
  17. Fungal Biofilms and Polymicrobial Diseases.Journal of fungi (Basel, Switzerland) · 2017
    Review
  18. Inactivation of genes TEC1 and EFG1 inJournal of oral microbiology · 2017
    Article
  19. Effect of the Ethyl Acetate Fraction ofFrontiers in microbiology · 2017
    Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 3 countries.

Montserrat Martínez-GomarizUnidad de Proteómica, Universidad Complutense de Madrid-Parque Científico de Madrid (UCM-PCM), Madrid, Spain.
Palani Perumal
Satish Mekala
César Nombela
W LaJean Chaffin
Concha Gil
Universidad Complutense de Madrid · ESTexas Tech University · USTexas Tech University Health Sciences Center · US

Funding

Candida albicans oral biofilmR01DE014029 · NIDCR · TEXAS TECH UNIVERSITY HEALTH SCIS CENTER · PI CHAFFIN, WELDA LAJEAN · 2001 to 2004
$1.3M
A proteomics approach to Candida albicans biofilmR03TW006307 · FIC · TEXAS TECH UNIVERSITY HEALTH SCIS CENTER · PI CHAFFIN, WELDA LAJEAN · 2003 to 2005
$108k
FIC NIH HHS 1 RO3 TW006307FIC NIH HHS R03 TW006307NIDCR NIH HHS 1R01 DE 14029NIDCR NIH HHS R01 DE014029
6 · The paper itself

Abstract

Candida albicans is a human commensal and opportunistic pathogen that participates in biofilm formation on host surfaces and on medical devices. We used DIGE analysis to assess the cytoplasmic and non-covalently attached cell-surface proteins in biofilm formed on polymethylmethacrylate and planktonic yeast cells and hyphae. Of the 1490 proteins spots from cytoplasmic and 580 protein spots from the surface extracts analyzed, 265 and 108 were differentially abundant respectively (>or=1.5-fold, p <0.05). Differences of both greater and lesser abundance were found between biofilms and both planktonic conditions as well as between yeast cells and hyphae. The identity of 114 cytoplasmic and 80 surface protein spots determined represented 73 and 25 unique proteins, respectively. Analyses showed that yeast cells differed most in cytoplasmic profiling while biofilms differed most in surface profiling. Several processes and functions were significantly affected by the differentially abundant cytoplasmic proteins. Particularly noted were many of the enzymes of respiratory and fermentative pentose and glucose metabolism, folate interconversions and proteins associated with oxidative and stress response functions, host response, and multi-organism interaction. The differential abundance of cytoplasmic and surface proteins demonstrated that sessile and planktonic organisms have a unique profile.

Indexed as

BiofilmsCandida albicansCell MembraneCytoplasmElectrophoresis, Gel, Two-DimensionalFungal ProteinsHyphaeMembrane ProteinsMetabolic Networks and PathwaysOxidative StressProteomeSpectrometry, Mass, Matrix-Assisted Laser Desorption-IonizationFungal ProteinsMembrane ProteinsProteome

Identifiers

PMID19322777
PMCPMC2818216
OpenAlexW2124008198

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.