Evidence map›Paper›PMID 19320834›Full record

ArticleMolecular microbiology2009

HlyU acts as an H-NS antirepressor in the regulation of the RTX toxin gene essential for the virulence of the human pathogen Vibrio vulnificus CMCP6.

Moqing Liu, Hiroaki Naka, Jorge H Crosa

Abstract read
In one paragraph

Article in Molecular microbiology, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 34 papers.

0numbers the graph read from it
0cells of the map it votes in
34citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

34 citing papers in PubMed.

  1. Review
  2. Article
  3. Article
  4. Targeting Virulence Genes Expression inInternational journal of molecular sciences · 2022
    Article
  5. Review
  6. Review
  7. A MARTX ToxinmBio · 2020
    Article
  8. Article
  9. Review
  10. Frontiers in immunology · 2020
    Review
  11. Cold shock induces chromosomalAntimicrobial agents and chemotherapy · 2019
    Article
  12. Article
  13. Article
  14. Frontiers in immunology · 2018
    Article
  15. Frontiers in cellular and infection microbiology · 2018
    Article
  16. Article
  17. Article
  18. Identification and characterization ofThe Journal of biological chemistry · 2017
    Article
  19. Review
  20. Phylogeny ofFrontiers in microbiology · 2017
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Moqing LiuDepartment of Molecular Microbiology and Immunology, Oregon Health and Science University, Portland, OR 97239, USA.
Hiroaki Naka
Jorge H Crosa

Funding

IRON UPTAKE AS A VIRULENCE FACTOR IN PATHOGENIC VIBRIOSR01AI019018 · NIAID · OREGON HEALTH & SCIENCE UNIVERSITY · PI CROSA, JORGE H · 1985 to 2011
$3.9M
Iron and pathogenesis in infections by Vibrio vulnificusR01AI065981 · NIAID · OREGON HEALTH & SCIENCE UNIVERSITY · PI CROSA, JORGE H · 2007 to 2011
$2.1M
NIAID NIH HHS AI065981NIAID NIH HHS AI19018NIAID NIH HHS R01 AI019018NIAID NIH HHS R01 AI065981
6 · The paper itself

Abstract

In Vibrio vulnificus, HlyU upregulates the expression of the large RTX toxin gene. In this work we identified the binding site of HlyU to -417 to -376 bp of the rtxA1 operon transcription start site. lacZ fusions for a series of progressive deletions from the rtxA1 operon promoter showed that transcriptional activity increased independently of HlyU when its binding site was absent. Thus HlyU must regulate the rtxA1 operon expression by antagonizing a negative regulator. Concomitantly we found that an hns mutant resulted in an increase in the expression of the rtxA1 operon genes. Multiple copies of HlyU can increase the promoter activity only in the presence of H-NS underscoring the hypothesis that HlyU must alleviate the repression by this protein. H-NS binds to a region that extends upstream and downstream of the rtxA1 operon promoter. In the upstream region it binds to five AT-rich sites of which two overlap the HlyU binding site. Competitive footprinting and gel shift data demonstrate HlyU's higher affinity as compared with H-NS resulting in the de-repression and a corresponding increased expression of the rtxA1 operon.

Indexed as

Bacterial ProteinsBacterial ToxinsBase SequenceBinding SitesDNA-Binding ProteinsGene Expression Regulation, BacterialMolecular Sequence DataOperonPromoter Regions, GeneticRepressor ProteinsTranscription FactorsTranscription Initiation SiteVibrio vulnificusVirulenceBacterial ProteinsBacterial ToxinsDNA-Binding ProteinsH-NS protein, bacteriaRepressor ProteinsRtxA protein, Vibrio choleraeTranscription Factors

Identifiers

PMID19320834
PMCPMC2704492

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.