Evidence map›Paper›PMID 19318553›Full record

ArticleCancer research2009

A breast cancer risk haplotype in the caspase-8 gene.

Neil Duncan Shephard, Ryan Abo, Sushila Harkisandas Rigas, Bernd Frank, Wei-Yu Lin, Ian Wallace Brock, Adam Shippen, Sabapathy Prakash Balasubramanian, Malcolm Walter Ronald Reed, Claus Rainer Bartram and 8 more

Open access · bronzeAbstract read
In one paragraph

Article in Cancer research, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers, 5 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed, 5 pooled it
2.9field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 5 syntheses or guidelines pooled it, 33 citations in OpenAlex.

  1. Pooled it
  2. Pooled it
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  4. Fine-mapping CASP8 risk variants in breast cancer.Cancer epidemiology, biomarkers & prevention : a publication of the American Association for Cancer Research, cosponsored by the American Society of Preventive Oncology · 2012
    Pooled it
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  6. Potential advantage of clinical exome sequencing inJournal of medical genetics · 2026
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  18. Association of the variants CASP8 D302H and CASP10 V410I with breast and ovarian cancer risk in BRCA1 and BRCA2 mutation carriers.Cancer epidemiology, biomarkers & prevention : a publication of the American Association for Cancer Research, cosponsored by the American Society of Preventive Oncology · 2010
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

18 authors at 8 institutions in 4 countries.

Neil Duncan ShephardInstitute for Cancer Studies, School of Medicine and Biomedical Sciences, University of Sheffield, Sheffield, United Kingdom.
Ryan Abo
Sushila Harkisandas Rigas
Bernd Frank
Wei-Yu Lin
Ian Wallace Brock
Adam Shippen
Sabapathy Prakash Balasubramanian
Malcolm Walter Ronald Reed
Claus Rainer Bartram
Alfons Meindl
Rita Katharina Schmutzler
Christoph Engel
Barbara Burwinkel
Lisa Anne Cannon-Albright
Kristina Allen-Brady
Nicola Jane Camp
Angela Cox
University of Utah · USUniversity of Sheffield · GBGerman Cancer Research Center · DEHeidelberg University · DEInstitute of Human Genetics · PLKlinikum rechts der Isar · DELeipzig University · DEUniversity Hospital Cologne · DE

Funding

GENETIC ANALYSIS TECHNIQUES FOR COMMON CANCERSK07CA098364 · NCI · UNIVERSITY OF UTAH · PI CAMP, NICOLA J. · 2004 to 2008
$701k
Breast Cancer Now 2004NOV49NCI NIH HHS CA98364NCI NIH HHS K07 CA098364NCI NIH HHS N01 PC035141NCI NIH HHS N01-PC-35141
6 · The paper itself

Abstract

Recent large-scale studies have been successful in identifying common, low-penetrance variants associated with common cancers. One such variant in the caspase-8 (CASP8) gene, D302H (rs1045485), has been confirmed to be associated with breast cancer risk, although the functional effect of this polymorphism (if any) is not yet clear. In order to further map the CASP8 gene with respect to breast cancer susceptibility, we performed extensive haplotype analyses using single nucleotide polymorphisms (SNP) chosen to tag all common variations in the gene (tSNP). We used a staged study design based on 3,200 breast cancer and 3,324 control subjects from the United Kingdom, Utah, and Germany. Using a haplotype-mining algorithm in the UK cohort, we identified a four-SNP haplotype that was significantly associated with breast cancer and that was superior to any other single or multi-locus combination (P=8.0 x 10(-5)), with a per allele odds ratio and 95% confidence interval of 1.30 (1.12-1.49). The result remained significant after adjustment for the multiple testing inherent in mining techniques (false discovery rate, q=0.044). As expected, this haplotype includes the D302H locus. Multicenter analyses on a subset of the tSNPs yielded consistent results. This risk haplotype is likely to carry one or more underlying breast cancer susceptibility alleles, making it an excellent candidate for resequencing in homozygous individuals. An understanding of the mode of action of these alleles will aid risk assessment and may lead to the identification of novel treatment targets in breast cancer.

Indexed as

Breast NeoplasmsCase-Control StudiesCaspase 8Chromosome MappingFemaleGenetic Predisposition to DiseaseHaplotypesHumansPolymorphism, Single NucleotideCaspase 8

Identifiers

PMID19318553
PMCPMC2730164
OpenAlexW2157109007

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.