Evidence map›Paper›PMID 19317916›Full record

ArticleMolecular cancer2009

Identification of novel cyclooxygenase-2-dependent genes in Helicobacter pylori infection in vivo.

Anna K Walduck, Matthias Weber, Christian Wunder, Stefan Juettner, Manfred Stolte, Michael Vieth, Bertram Wiedenmann, Thomas F Meyer, Michael Naumann, Michael Hoecker

Open access · goldAbstract read
In one paragraph

Article in Molecular cancer, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
1.5field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 12 citations in OpenAlex.

  1. Article
  2. Essential Oil from VietnameseMolecules (Basel, Switzerland) · 2024
    Article
  3. Article
  4. Review
  5. Gastric cancer-molecular and clinical dimensions.Nature reviews. Clinical oncology · 2013
    Review
  6. Article
  7. Gastrin, inflammation, and carcinogenesis.Current opinion in endocrinology, diabetes, and obesity · 2010
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 5 institutions in 2 countries.

Anna K WalduckDepartment of Molecular Biology, Max Planck Institute for Infection Biology, Berlin, Germany. AWalduck@unimelb.edu.au
Matthias Weber
Christian Wunder
Stefan Juettner
Manfred Stolte
Michael Vieth
Bertram Wiedenmann
Thomas F Meyer
Michael Naumann
Michael Hoecker
Max Planck Institute for Infection Biology · DEBayreuth Medical Center · DECharité - Universitätsmedizin Berlin · DEMax Planck Society · DEOtto-von-Guericke University Magdeburg · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundHelicobacter pylori is a crucial determining factor in the pathogenesis of benign and neoplastic gastric diseases. Cyclooxygenase-2 (Cox-2) is the inducible key enzyme of arachidonic acid metabolism and is a central mediator in inflammation and cancer. Expression of the Cox-2 gene is up-regulated in the gastric mucosa during H. pylori infection but the pathobiological consequences of this enhanced Cox-2 expression are not yet characterized. The aim of this study was to identify novel genes down-stream of Cox-2 in an in vivo model, thereby identifying potential targets for the study of the role of Cox- 2 in H. pylori pathogenesis and the initiation of pre- cancerous changes.

resultsGene expression profiles in the gastric mucosa of mice treated with a specific Cox-2 inhibitor (NS398) or vehicle were analysed at different time points (6, 13 and 19 wk) after H. pylori infection. H. pylori infection affected the expression of 385 genes over the experimental period, including regulators of gastric physiology, proliferation, apoptosis and mucosal defence. Under conditions of Cox-2 inhibition, 160 target genes were regulated as a result of H. pylori infection. The Cox-2 dependent subset included those influencing gastric physiology (Gastrin, Galr1), epithelial barrier function (Tjp1, connexin45, Aqp5), inflammation (Icam1), apoptosis (Clu) and proliferation (Gdf3, Igf2). Treatment with NS398 alone caused differential expression of 140 genes, 97 of which were unique, indicating that these genes are regulated under conditions of basal Cox-2 expression.

conclusionThis study has identified a panel of novel Cox-2 dependent genes influenced under both normal and the inflammatory conditions induced by H. pylori infection. These data provide important new links between Cox-2 and inflammatory processes, epithelial repair and integrity.

Indexed as

Gene Expression ProfilingHelicobacter pyloriAnimalsCells, CulturedCyclooxygenase 2DinoprostoneGastric MucosaHelicobacter InfectionsMiceNitrobenzenesSulfonamidesUp-RegulationCyclooxygenase 2DinoprostoneN-(2-cyclohexyloxy-4-nitrophenyl)methanesulfonamideNitrobenzenesSulfonamides

Identifiers

PMID19317916
PMCPMC2667483
OpenAlexW2111662224

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.