Evidence map›Paper›PMID 19317913›Full record

ArticleMalaria journal2009

Toll-like receptor polymorphisms in malaria-endemic populations.

Jennifer A Greene, Ann M Moormann, John Vulule, Moses J Bockarie, Peter A Zimmerman, James W Kazura

Open access · goldAbstract read
In one paragraph

Article in Malaria journal, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
4.9field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 54 citations in OpenAlex.

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  15. The Role of TLR2 in Infection and Immunity.Frontiers in immunology · 2012
    Article
  16. Review
  17. Article
  18. A preliminary assessment ofPapua and New Guinea medical journal
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 4 institutions in 3 countries.

Jennifer A GreeneCenter for Global Health and Diseases, Case Western Reserve University, Cleveland OH, USA. jag40@cwru.edu
Ann M Moormann
John Vulule
Moses J Bockarie
Peter A Zimmerman
James W Kazura
Case Western Reserve University · USCenter for Global Health · USKenya Medical Research Institute · KEPapua New Guinea Institute of Medical Research · PG

Funding

Immunologic Studies of Endemic Burkitt's LymphomaK08AI051565 · NIAID · CASE WESTERN RESERVE UNIVERSITY · PI MOORMANN, ANN M · 2002 to 2006
$542k
NIAID NIH HHS K08 AI051565
6 · The paper itself

Abstract

backgroundToll-like receptors (TLR) and related downstream signaling pathways of innate immunity have been implicated in the pathogenesis of Plasmodium falciparum malaria. Because of their potential role in malaria pathogenesis, polymorphisms in these genes may be under selective pressure in populations where this infectious disease is endemic.

methodsA post-PCR Ligation Detection Reaction-Fluorescent Microsphere Assay (LDR-FMA) was developed to determine the frequencies of TLR2, TLR4, TLR9, MyD88-Adaptor Like Protein (MAL) single nucleotide polymorphisms (SNPs), and TLR2 length polymorphisms in 170 residents of two regions of Kenya where malaria transmission is stable and high (holoendemic) or episodic and low, 346 residents of a malaria holoendemic region of Papua New Guinea, and 261 residents of North America of self-identified ethnicity.

resultsThe difference in historical malaria exposure between the two Kenyan sites has significantly increased the frequency of malaria protective alleles glucose-6-phoshpate dehydrogenase (G6PD) and Hemoglobin S (HbS) in the holoendemic site compared to the episodic transmission site. However, this study detected no such difference in the TLR2, TLR4, TLR9, and MAL allele frequencies between the two study sites. All polymorphisms were in Hardy Weinberg Equilibrium in the Kenyan and Papua New Guinean populations. TLR9 SNPs and length polymorphisms within the TLR2 5' untranslated region were the only mutant alleles present at a frequency greater than 10% in all populations.

conclusionSimilar frequencies of TLR2, TLR4, TLR9, and MAL genetic polymorphisms in populations with different histories of malaria exposure suggest that these innate immune pathways have not been under strong selective pressure by malaria. Genotype frequencies are consistent with Hardy-Weinberg Equilibrium and the Neutral Theory, suggesting that genetic drift has influenced allele frequencies to a greater extent than selective pressure from malaria or any other infectious agents in these populations.

Indexed as

Genetic Predisposition to DiseaseAnimalsEndemic DiseasesGenotypeHumansKenyaMalaria, FalciparumMembrane GlycoproteinsNorth AmericaPapua New GuineaPlasmodium falciparumPolymerase Chain ReactionPolymorphism, Single NucleotideReceptors, Interleukin-1Toll-Like ReceptorsMembrane GlycoproteinsReceptors, Interleukin-1TIRAP protein, humanToll-Like Receptors

Identifiers

PMID19317913
PMCPMC2667436
OpenAlexW2018505592

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.