Evidence map›Paper›PMID 19309520›Full record

ArticleBMC medical genetics2009

Nitric oxide synthase 2A (NOS2A) polymorphisms are not associated with invasive pneumococcal disease.

Antony Payton, Debbie Payne, Limangeni A Mankhambo, Daniel L Banda, C Anthony Hart, William Er Ollier, Enitan D Carrol

Open access · goldAbstract readComparative Study
In one paragraph

Article in BMC medical genetics, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed, 1 pooled it
1.3field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 1 synthesis or guideline pooled it, 14 citations in OpenAlex.

  1. Pooled it
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 2 countries.

Antony PaytonCentre for Integrated Genomic Medical Research, Stopford Building, The University of Manchester, Manchester, UK. Tony.Payton@man.ac.uk
Debbie Payne
Limangeni A Mankhambo
Daniel L Banda
C Anthony Hart
William Er Ollier
Enitan D Carrol
University of Liverpool · GBUniversity of Manchester · GBMalawi-Liverpool-Wellcome Trust Clinical Research Programme · MW

Funding

Wellcome Trust 068026
6 · The paper itself

Abstract

backgroundStreptococcus pneumoniae (pneumococcus) is responsible for over one million deaths per year, with young children, the elderly and immunocompromised individuals being most at risk. Approximately half of East African children have been reported to be asymptomatic carriers of pneumococcus with invasive infection occurring after the disruption of the respiratory membrane which is believed to be caused by the host immune response. Racial incidence of invasive pneumococcal disease (IPD) is higher in certain populations even after adjusting for environmental factors suggesting a genetic component to disease susceptibility. The nitric oxide synthase 2A (NOS2A) gene is responsible for the production of nitric oxide under pathological conditions including host defence against bacterial infection. Nitric oxide is a modulator of apoptotic and inflammatory cascades and endothelial permeability. We hypothesised that genetic variants within this gene may predispose to disease risk and survival.

methodsA cohort of 299 children with IPD (221 meningitis, 41 pneumonia and 37 with bacteraemia) and 931 age matched controls from Malawi were used in this study. We investigated nine haplotype tagging single nucleotide polymorphisms within the NOS2A gene and compared the presence or absence of the minor alleles in cases and controls and survivors and non-survivors within the cases.

resultsWe observed no significant associations between cases and controls or with survival in either all IPD cases or in the separate analysis of meningitis cases. A near significant association was obtained for the comparison of rs8078340 in cases and controls (p-value, 0.078). However, results were unadjusted for multiple testing.

conclusionOur results suggest that polymorphic variation within the NOS2A gene does not influence invasive pneumococcal disease susceptibility or survival.

Indexed as

Polymorphism, Single NucleotideAdolescentAllelesCase-Control StudiesChildChild, PreschoolCohort StudiesGene FrequencyGenotypeHumansInfantMalawiNitric Oxide Synthase Type IIPneumococcal InfectionsNitric Oxide Synthase Type IINOS2 protein, human

Identifiers

PMID19309520
PMCPMC2666671
OpenAlexW2032084425

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.