Evidence map›Paper›PMID 19304931›Full record

ArticlePlant physiology2009

Phospholipase D activation is an early component of the salicylic acid signaling pathway in Arabidopsis cell suspensions.

Ondrej Krinke, Matyás Flemr, Chantal Vergnolle, Sylvie Collin, Jean-Pierre Renou, Ludivine Taconnat, Agnès Yu, Lenka Burketová, Olga Valentová, Alain Zachowski and 1 more

Open access · hybridAbstract read
In one paragraph

Article in Plant physiology, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 36 papers.

0numbers the graph read from it
0cells of the map it votes in
36citing papers in PubMed
7.2field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

36 citing papers in PubMed, 73 citations in OpenAlex.

  1. Article
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  3. Review
  4. Article
  5. Review
  6. Deciphering the Binding of Salicylic Acid toInternational journal of molecular sciences · 2020
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  14. Functional diversity of jasmonates in rice.Rice (New York, N.Y.) · 2015
    Article
  15. Review
  16. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 4 institutions in 2 countries.

Ondrej KrinkeUPMC Univ Paris 06, Unité de Recherche 5, Centre National de la Recherche Scientifique, Equipe d'Accueil Conventionnée 7180, Laboratoire de Physiologie Cellulaire et Moléculaire des Plantes, F-94200 Ivry-sur-Seine, France.
Matyás Flemr
Chantal Vergnolle
Sylvie Collin
Jean-Pierre Renou
Ludivine Taconnat
Agnès Yu
Lenka Burketová
Olga Valentová
Alain Zachowski
Eric Ruelland
Czech Academy of Sciences, Institute of Experimental Botany · CZCentre National de la Recherche Scientifique · FRLaboratoire de physiologie cellulaire et moléculaireSorbonne Université · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Salicylic acid (SA) plays a central role in defense against pathogen attack, as well as in germination, flowering, senescence, and the acquisition of thermotolerance. In this report we investigate the involvement of phospholipase D (PLD) in the SA signaling pathway. In presence of exogenous primary alcohols, the production of phosphatidic acid by PLD is diverted toward the formation of phosphatidylalcohols through a reaction called transphosphatidylation. By in vivo metabolic phospholipid labeling with (33)P(i), PLD activity was found to be induced 45 min after addition of SA. We show that incubation of Arabidopsis (Arabidopsis thaliana) cell suspensions with primary alcohols inhibited the induction of two SA-responsive genes, PATHOGENESIS-RELATED1 and WRKY38, in a dose-dependent manner. This inhibitory effect was more pronounced when the primary alcohols were more hydrophobic. Secondary or tertiary alcohols had no inhibitory effect. These results provide compelling arguments for PLD activity being upstream of the induction of these genes by SA. A subsequent study of n-butanol effects on the SA-responsive transcriptome identified 1,327 genes differentially expressed upon SA treatment. Strikingly, the SA response of 380 of these genes was inhibited by n-butanol but not by tert-butanol. A detailed analysis of the regulation of these genes showed that PLD could act both positively and negatively, either on gene induction or gene repression. The overlap with the previously described phosphatidylinositol-4-kinase pathway is discussed.

Indexed as

Signal Transduction1-ButanolArabidopsisArabidopsis ProteinsEnzyme ActivationGene Expression ProfilingGene Expression Regulation, PlantOligonucleotide Array Sequence AnalysisPhospholipase DPromoter Regions, GeneticSalicylic Acidtert-Butyl AlcoholTranscription Factors1-ButanolArabidopsis ProteinsAt5g22570 protein, ArabidopsisPhospholipase DPR-1 protein, ArabidopsisSalicylic Acidtert-Butyl AlcoholTranscription Factors

Identifiers

PMID19304931
PMCPMC2675726
OpenAlexW2110197051

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.