Evidence map›Paper›PMID 19304824›Full record

ArticleApplied and environmental microbiology2009

Failure to detect Helicobacter pylori DNA in drinking and environmental water in Dhaka, Bangladesh, using highly sensitive real-time PCR assays.

Anders Janzon, Asa Sjöling, Asa Lothigius, Dilruba Ahmed, Firdausi Qadri, Ann-Mari Svennerholm

Abstract readEvaluation Study
In one paragraph

Article in Applied and environmental microbiology, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed.

  1. On the Role of Food in the Transmission ofFoods (Basel, Switzerland) · 2025
    Review
  2. Effect of dilution factor on the isolation ofIranian journal of microbiology · 2022
    Article
  3. Efficacy of Loop-Mediated Isothermal Amplification forDiagnostics (Basel, Switzerland) · 2021
    Article
  4. The Puzzle of Coccoid Forms ofAntibiotics (Basel, Switzerland) · 2020
    Review
  5. Potential transmission sources ofJournal of environmental health science & engineering · 2019
    Article
  6. World journal of gastroenterology · 2018
    Review
  7. Article
  8. CD4Gastric cancer : official journal of the International Gastric Cancer Association and the Japanese Gastric Cancer Association · 2017
    Article
  9. Article
  10. Article
  11. Review
  12. Article
  13. Review
  14. Article
  15. Review
  16. Optimizing the growth of stressed Helicobacter pylori.Journal of microbiological methods · 2011
    Article
  17. mSphere
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Anders JanzonDepartment of Microbiology and Immunology, Sahlgrenska Academy at the University of Gothenburg, Box 435, SE-405 30 Gothenburg, Sweden. anders.janzon@microbio.gu.se
Asa Sjöling
Asa Lothigius
Dilruba Ahmed
Firdausi Qadri
Ann-Mari Svennerholm

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The main transmission pathway of Helicobacter pylori has not been determined, but several reports have described detection of H. pylori DNA in drinking and environmental water, suggesting that H. pylori may be waterborne. To address this possibility, we developed, tested, and optimized two complementary H. pylori-specific real-time PCR assays for quantification of H. pylori DNA in water. The minimum detection level of the assays including collection procedures and DNA extraction was shown to be approximately 250 H. pylori genomes per water sample. Using our assays, we then analyzed samples of drinking and environmental water (n = 75) and natural water biofilms (n = 21) from a high-endemicity area in Bangladesh. We could not identify H. pylori DNA in any of the samples, even though other pathogenic bacteria have been found previously in the same water samples by using the same methodology. A series of control experiments were performed to ensure that the negative results were not falsely caused by PCR inhibition, nonspecific assays, degradation of template DNA, or low detection sensitivity. Our results suggest that it is unlikely that the predominant transmission route of H. pylori in this area is waterborne.

Indexed as

Water MicrobiologyBangladeshDNA, BacterialHelicobacter pyloriPolymerase Chain ReactionSensitivity and SpecificityDNA, Bacterial

Identifiers

PMID19304824
PMCPMC2681616

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.