Evidence map›Paper›PMID 19304784›Full record

ArticleHuman molecular genetics2009

Association between invasive ovarian cancer susceptibility and 11 best candidate SNPs from breast cancer genome-wide association study.

Honglin Song, Susan J Ramus, Susanne Krüger Kjaer, Richard A DiCioccio, Georgia Chenevix-Trench, Celeste Leigh Pearce, Estrid Hogdall, Alice S Whittemore, Valerie McGuire, Claus Hogdall and 42 more

Open access · bronzeAbstract read
In one paragraph

Article in Human molecular genetics, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 32 papers, 8 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
32citing papers in PubMed, 8 pooled it
4.2field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

32 citing papers in PubMed, 8 syntheses or guidelines pooled it, 57 citations in OpenAlex.

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  9. Gene polymorphisms ofJournal of Cancer · 2024
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  16. No association between ovarian cancer susceptibility variants and breast cancer risk among Chinese women.Cancer epidemiology, biomarkers & prevention : a publication of the American Association for Cancer Research, cosponsored by the American Society of Preventive Oncology · 2013
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

52 authors at 18 institutions in 6 countries.

Honglin SongCR-UK Department of Oncology, Strangeways Research Laboratory, University of Cambridge, Cambridge, UK. honglin@srl.cam.ac.uk
Susan J Ramus
Susanne Krüger Kjaer
Richard A DiCioccio
Georgia Chenevix-Trench
Celeste Leigh Pearce
Estrid Hogdall
Alice S Whittemore
Valerie McGuire
Claus Hogdall
Jan Blaakaer
Anna H Wu
David J Van Den Berg
Daniel O Stram
Usha Menon
Aleksandra Gentry-Maharaj
Ian J Jacobs
Penny M Webb
Jonathan Beesley
Xiaoqing Chen
Australian Cancer (Ovarian) Study
Australian Ovarian Cancer Study Group
Mary Anne Rossing
Jennifer A Doherty
Jenny Chang-Claude
Shan Wang-Gohrke
Marc T Goodman
Galina Lurie
Pamela J Thompson
Michael E Carney
Roberta B Ness
Kirsten Moysich
Ellen L Goode
Robert A Vierkant
Julie M Cunningham
Stephanie Anderson
Joellen M Schildkraut
Andrew Berchuck
Edwin S Iversen
Patricia G Moorman
Montserrat Garcia-Closas
Stephen Chanock
Jolanta Lissowska
Louise Brinton
Hoda Anton-Culver
Argyrios Ziogas
Wendy R Brewster
Bruce A J Ponder
Douglas F Easton
Simon A Gayther
Paul D P Pharoah
Ovarian Cancer Association Consortium (OCAC)
University of Cambridge · GBUniversity of Hawaiʻi at Mānoa · USMayo Clinic · USQIMR Berghofer Medical Research Institute · AUUniversity College London · GBUniversity of Southern California · USNational Cancer Institute · USRoswell Park Comprehensive Cancer Center · USDanish Cancer Society · DKDuke Medical Center · USDuke University · USFred Hutch Cancer Center · USGerman Cancer Research Center · DEStanford University · USUniversity of California, Irvine · USUniversity of North Carolina at Chapel Hill · USAarhus University Hospital · DKUniversity of Copenhagen · DK

Funding

Two-Spirit Films in Indigenous Cancer HealthP30CA016056 · NCI · ROSWELL PARK CANCER INSTITUTE CORP · PI MARK G FRATTINI · 1985 to 2026
$116.6M
Hormone-Related CancersZIACP010126 · NCI · DIVISION OF CANCER EPIDEMIOLOGY AND GENETICS · PI GIERACH, GRETCHEN · 2009 to 2025
$103.5M
COLLABORATIVE STUDY OF OVARIAN CANCER IN TWO RISK GROUPSR01CA058598 · NCI · UNIVERSITY OF HAWAII AT MANOA · PI GOODMAN, MARC T · 1993 to 2012
$4.6M
Epidemiology of Ovarian Cancer:New HypothesesR01CA087538 · NCI · FRED HUTCHINSON CANCER RESEARCH CENTER · PI ROSSING, MARY ANNE · 2002 to 2006
$3.5M
Steroid Hormone Genes and Ovarian Cancer RiskR01CA112523 · NCI · FRED HUTCHINSON CANCER RESEARCH CENTER · PI ROSSING, MARY ANNE · 2006 to 2010
$3.3M
HEREDITARY BREAST CANCER--GENETIC AND MOLECULAR STUDIESR01CA058860 · NCI · UNIVERSITY OF CALIFORNIA-IRVINE · PI ANTON-CULVER, HODA A · 1994 to 2008
$3.1M
Genetic Variation in the NF-kappaB Pathway and Ovarian Cancer EtiologyR01CA122443 · NCI · MAYO CLINIC ROCHESTER · PI GOODE, ELLEN L. · 2007 to 2012
$2.7M
HEREDITARY BREAST CANCER--GENETIC AND MOLECULAR STUDIESU01CA058860 · NCI · UNIVERSITY OF CALIFORNIA IRVINE · PI ANTON-CULVER, HODA A. · 1997 to 2002
$2.5M
Hormonal Factors in Invasive and LMP Ovarian CancersK07CA092044 · NCI · UNIVERSITY OF CALIFORNIA-IRVINE · PI BREWSTER, WENDY ROSAMUND · 2003 to 2006
$509k
RISK FACTORS AND PROGNOSTIC FACTORS FOR OVARIAN CANCERR01CA061107 · NCI · DANISH CANCER SOCIETY · PI KJAER, SUSANNE K · 1993 to 1995
–
SURVEILLANCE EPIDEMIOLOGY AND END RESULTS (SEER)N01CN055424 · CN · UNIVERSITY OF HAWAII AT MANOA · PI KOLONEL, LAURENCE N · 1985 to 1989
–
Cancer Research UK 10118Cancer Research UK 10119Cancer Research UK 10124Cancer Research UK 11022Cancer Research UK 19275Cancer Research UK A10119Cancer Research UK A10124Department of HealthMedical Research Council G0801875NCI NIH HHS CA16056NCI NIH HHS CA-58860NCI NIH HHS CA71766NCI NIH HHS CA-92044NCI NIH HHS K07 CA092044NCI NIH HHS N01-CN-55424NCI NIH HHS N01 PC035137NCI NIH HHS N01-PC-35137NCI NIH HHS P30 CA016056NCI NIH HHS R01 CA058860NCI NIH HHS R01 CA087538NCI NIH HHS R01 CA112523NCI NIH HHS R01 CA122443NCI NIH HHS R01-CA-58598NCI NIH HHS R01 CA61107NCI NIH HHS R01 CA87538NCI NIH HHS U01 CA058860
6 · The paper itself

Abstract

Because both ovarian and breast cancer are hormone-related and are known to have some predisposition genes in common, we evaluated 11 of the most significant hits (six with confirmed associations with breast cancer) from the breast cancer genome-wide association study for association with invasive ovarian cancer. Eleven SNPs were initially genotyped in 2927 invasive ovarian cancer cases and 4143 controls from six ovarian cancer case-control studies. Genotype frequencies in cases and controls were compared using a likelihood ratio test in a logistic regression model stratified by study. Initially, three SNPs (rs2107425 in MRPL23, rs7313833 in PTHLH, rs3803662 in TNRC9) were weakly associated with ovarian cancer risk and one SNP (rs4954956 in NXPH2) was associated with serous ovarian cancer in non-Hispanic white subjects (P-trend < 0.1). These four SNPs were then genotyped in an additional 4060 cases and 6308 controls from eight independent studies. Only rs4954956 was significantly associated with ovarian cancer risk both in the replication study and in combined analyses. This association was stronger for the serous histological subtype [per minor allele odds ratio (OR) 1.07 95% CI 1.01-1.13, P-trend = 0.02 for all types of ovarian cancer and OR 1.14 95% CI 1.07-1.22, P-trend = 0.00017 for serous ovarian cancer]. In conclusion, we found that rs4954956 was associated with increased ovarian cancer risk, particularly for serous ovarian cancer. However, none of the six confirmed breast cancer susceptibility variants we tested was associated with ovarian cancer risk. Further work will be needed to identify the causal variant associated with rs4954956 or elucidate its function.

Indexed as

Genome-Wide Association StudyPolymorphism, Single NucleotideBreast NeoplasmsCase-Control StudiesFemaleGenetic Predisposition to DiseaseGlycoproteinsHumansNeuropeptidesOvarian NeoplasmsRisk FactorsWhite PeopleGlycoproteinsneurexophilinNeuropeptides

Identifiers

PMID19304784
PMCPMC2685754
OpenAlexW2141070232

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.