Evidence map›Paper›PMID 19299629›Full record

ArticleStroke2009

Sequencing of TGF-beta pathway genes in familial cases of intracranial aneurysm.

Teresa Santiago-Sim, Sumy Mathew-Joseph, Hariyadarshi Pannu, Dianna M Milewicz, Christine E Seidman, J G Seidman, Dong H Kim

Open access · bronzeAbstract read
In one paragraph

Article in Stroke, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed, 1 pooled it
1.1field-weighted citation impact, top 24% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed, 1 synthesis or guideline pooled it, 37 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 1 institution in 1 country.

Teresa Santiago-SimDepartment of Genetics, Harvard Medical School, Boston, Massachusetts, USA.
Sumy Mathew-Joseph
Hariyadarshi Pannu
Dianna M Milewicz
Christine E Seidman
J G Seidman
Dong H Kim
Harvard University · US

Funding

THE GENETIC BASIS OF INTRACRANIAL ANEURYSMSK23RR016186 · NCRR · UNIVERSITY OF TEXAS HLTH SCI CTR HOUSTON · PI KIM, DONG H · 2002 to 2006
$622k
NCRR NIH HHS 7K23RR016186NCRR NIH HHS K23 RR016186
6 · The paper itself

Abstract

background and purposeFamilial aggregation of intracranial aneurysms (IA) strongly suggests a genetic contribution to pathogenesis. However, genetic risk factors have yet to be defined. For families affected by aortic aneurysms, specific gene variants have been identified, many affecting the receptors to transforming growth factor-beta (TGF-beta). In recent work, we found that aortic and intracranial aneurysms may share a common genetic basis in some families. We hypothesized, therefore, that mutations in TGF-beta receptors might also play a role in IA pathogenesis.

methodsTo identify genetic variants in TGF-beta and its receptors, TGFB1, TGFBR1, TGFBR2, ACVR1, TGFBR3, and ENG were directly sequenced in 44 unrelated patients with familial IA. Novel variants were confirmed by restriction digestion analyses, and allele frequencies were analyzed in cases versus individuals without known intracranial disease. Similarly, allele frequencies of a subset of known SNPs in each gene were also analyzed for association with IA.

resultsNo mutations were found in TGFB1, TGFBR1, TGFBR2, or ACVR1. Novel variants identified in ENG (p.A60E) and TGFBR3 (p.W112R) were not detected in at least 892 reference chromosomes. ENG p.A60E showed significant association with familial IA in case-control studies (P=0.0080). No association with IA could be found for any of the known polymorphisms tested.

conclusionsMutations in TGF-beta receptor genes are not a major cause of IA. However, we identified rare variants in ENG and TGFBR3 that may be important for IA pathogenesis in a subset of families.

Indexed as

Activin Receptors, Type IAgedAllelesAntigens, CDDNADNA PrimersEndoglinFemaleHumansIntracranial AneurysmMaleMiddle AgedPedigreePolymorphism, Single NucleotideProtein Serine-Threonine KinasesProteoglycansActivin Receptors, Type IACVR1 protein, humanAntigens, CDbetaglycanDNADNA PrimersEndoglinENG protein, humanProtein Serine-Threonine KinasesProteoglycansReceptors, Cell SurfaceReceptors, Transforming Growth Factor betaReceptor, Transforming Growth Factor-beta Type IReceptor, Transforming Growth Factor-beta Type IITGFBR1 protein, humanTransforming Growth Factor beta

Identifiers

PMID19299629
PMCPMC2678560
OpenAlexW2084178313

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.