Evidence map›Paper›PMID 19297529›Full record

ArticleMolecular biology of the cell2009

The exocyst protein Sec10 is necessary for primary ciliogenesis and cystogenesis in vitro.

Xiaofeng Zuo, Wei Guo, Joshua H Lipschutz

Open access · greenAbstract read
In one paragraph

Article in Molecular biology of the cell, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 124 papers.

0numbers the graph read from it
0cells of the map it votes in
124citing papers in PubMed
9.2field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

124 citing papers in PubMed, 183 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. The exocyst in ciliogenesis.Renal failure · 2025
    Review
  6. Intracellular and Extracellular Vesicle miRNA Signatures in Human iPSC-Derived Neural Stem Cells and Floor Plate Progenitors.FASEB journal : official publication of the Federation of American Societies for Experimental Biology · 2025
    Article
  7. Article
  8. Article
  9. Review
  10. Regulation of yeast polarized exocytosis by phosphoinositide lipids.Cellular and molecular life sciences : CMLS · 2024
    Review
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Initial ciliary assembly inMolecular biology of the cell · 2023
    Article
  20. Ciliogenesis membrane dynamics and organization.Seminars in cell & developmental biology · 2023
    Review

64 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Xiaofeng ZuoDepartment of Medicine, University of Pennsylvania, Philadelphia, PA 19104, USA.
Wei Guo
Joshua H Lipschutz
University of Pennsylvania · US

Funding

TRANSGENIC AND CHIMERIC MOUSE COREP30DK050306 · NIDDK · UNIVERSITY OF PENNSYLVANIA · PI GARY D. WU · 1997 to 2026
$32.5M
UAB Recessive PKD Research and Translational Core CenterP30DK074038 · NIDDK · UNIVERSITY OF ALABAMA AT BIRMINGHAM · PI YODER, BRADLEY K. · 2005 to 2019
$16.6M
Spatial regulation of exocytosisR01GM064690 · NIGMS · UNIVERSITY OF PENNSYLVANIA · PI GUO, WEI · 2002 to 2012
$2.5M
The Exocyst in Synthesis, Cystogenesis and TubulogenesisR01DK069909 · NIDDK · UNIVERSITY OF PENNSYLVANIA · PI LIPSCHUTZ, JOSHUA H · 2005 to 2009
$1.3M
Gene Expression Changes in Early 3D Renal TubulogenesisR21DK070980 · NIDDK · UNIVERSITY OF PENNSYLVANIA · PI LIPSCHUTZ, JOSHUA H · 2006 to 2007
$310k
The exocyst in ciliogenesis and cystogenesisI01BX000820 · VA · RALPH H JOHNSON VA MEDICAL CENTER · PI JOSHUA H LIPSCHUTZ · 2011 to 2026
–
BLRD VA I01 BX000820NIDDK NIH HHS DK-069909NIDDK NIH HHS DK-070980NIDDK NIH HHS P30 DK050306NIDDK NIH HHS P30 DK074038NIDDK NIH HHS P30 DK50306NIDDK NIH HHS R01 DK069909NIDDK NIH HHS R21 DK070980NIGMS NIH HHS GM-64690NIGMS NIH HHS R01 GM064690
6 · The paper itself

Abstract

Primary cilia are found on many epithelial cell types, including renal tubular epithelial cells, in which they are felt to participate in flow sensing and have been linked to the pathogenesis of cystic renal disorders such as autosomal dominant polycystic kidney disease. We previously localized the exocyst, an eight-protein complex involved in membrane trafficking, to the primary cilium of Madin-Darby canine kidney cells and showed that it was involved in cystogenesis. Here, using short hairpin RNA (shRNA) to knockdown exocyst expression and stable transfection to induce exocyst overexpression, we show that the exocyst protein Sec10 regulates primary ciliogenesis. Using immunofluorescence, scanning, and transmission electron microscopy, primary cilia containing only basal bodies are seen in the Sec10 knockdown cells, and increased ciliogenesis is seen in Sec10-overexpressing cells. These phenotypes do not seem to be because of gross changes in cell polarity, as apical, basolateral, and tight junction proteins remain properly localized. Sec10 knockdown prevents normal cyst morphogenesis when the cells are grown in a collagen matrix, whereas Sec10 overexpression results in increased cystogenesis. Transfection with human Sec10 resistant to the canine shRNA rescues the phenotype, demonstrating specificity. Finally, Par3 was recently shown to regulate primary cilia biogenesis. Par3 and the exocyst colocalized by immunofluorescence and coimmunoprecipitation, consistent with a role for the exocyst in targeting and docking vesicles carrying proteins necessary for primary ciliogenesis.

Indexed as

MorphogenesisAnimalsCarrier ProteinsCell LineCell PolarityCiliaDogsEpithelial CellsGene Knockdown TechniquesHumansImmunoprecipitationPhenotypePolycystic Kidney, Autosomal DominantProtein TransportRNA, Small InterferingTumor Suppressor ProteinsCarrier ProteinsEXOC5 protein, humanRNA, Small InterferingTumor Suppressor ProteinsVesicular Transport Proteins

Identifiers

PMID19297529
PMCPMC2682593
OpenAlexW2109998016

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.