Evidence map›Paper›PMID 19289793›Full record

ArticleThe Journal of cell biology2009

Sem1 is a functional component of the nuclear pore complex-associated messenger RNA export machinery.

Marius Boulos Faza, Stefan Kemmler, Sonia Jimeno, Cristina González-Aguilera, Andrés Aguilera, Ed Hurt, Vikram Govind Panse

Open access · bronzeAbstract read
In one paragraph

Article in The Journal of cell biology, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 67 papers.

0numbers the graph read from it
0cells of the map it votes in
67citing papers in PubMed
4.2field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

67 citing papers in PubMed, 107 citations in OpenAlex.

  1. Article
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  6. Review
  7. Article
  8. Article
  9. PCID2 Subunit of theCurrent issues in molecular biology · 2023
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  10. CRISPR/Cas9-Targeted Disruption of Two Highly HomologousInternational journal of molecular sciences · 2023
    Article
  11. Article
  12. A context-dependent and disordered ubiquitin-binding motif.Cellular and molecular life sciences : CMLS · 2022
    Article
  13. Article
  14. Nuclear mRNA Export and Aging.International journal of molecular sciences · 2022
    Review
  15. Article
  16. PCID2, a subunit of theRNA biology · 2021
    Article
  17. Article
  18. Article
  19. Review
  20. Review

7 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 3 countries.

Marius Boulos FazaInstitute of Biochemistry, ETH Zürich, Zürich, Switzerland.
Stefan Kemmler
Sonia Jimeno
Cristina González-Aguilera
Andrés Aguilera
Ed Hurt
Vikram Govind Panse
Centro Andaluz de Biología Molecular y Medicina Regenerativa · ESETH Zurich · CHHeidelberg University · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The evolutionarily conserved protein Sem1/Dss1 is a subunit of the regulatory particle (RP) of the proteasome, and, in mammalian cells, binds the tumor suppressor protein BRCA2. Here, we describe a new function for yeast Sem1. We show that sem1 mutants are impaired in messenger RNA (mRNA) export and transcription elongation, and induce strong transcription-associated hyper-recombination phenotypes. Importantly, Sem1, independent of the RP, is functionally linked to the mRNA export pathway. Biochemical analyses revealed that, in addition to the RP, Sem1 coenriches with components of two other multisubunit complexes: the nuclear pore complex (NPC)-associated TREX-2 complex that is required for transcription-coupled mRNA export, and the COP9 signalosome, which is involved in deneddylation. Notably, targeting of Thp1, a TREX-2 component, to the NPC is perturbed in a sem1 mutant. These findings reveal an unexpected nonproteasomal function of Sem1 in mRNA export and in prevention of transcription-associated genome instability. Thus, Sem1 is a versatile protein that might stabilize multiple protein complexes involved in diverse pathways.

Indexed as

RNA TransportActive Transport, Cell NucleusAICDA (Activation-Induced Cytidine Deaminase)COP9 Signalosome ComplexCytidine DeaminaseDNA, FungalDNA, Single-StrandedFungal ProteinsGene Expression Regulation, FungalGenomic InstabilityGenotypeMultiprotein ComplexesMutationNuclear PorePeptide HydrolasesPhenotype26S proteasome non-ATPase regulatory subunit 13AICDA (Activation-Induced Cytidine Deaminase)COP9 Signalosome ComplexCytidine DeaminaseDNA, FungalDNA, Single-StrandedFungal ProteinsMultiprotein ComplexesPeptide HydrolasesProteasome Endopeptidase ComplexRibonucleoproteinsRNA-Binding ProteinsRNA, FungalRNA, Messenger

Identifiers

PMID19289793
PMCPMC2699155
OpenAlexW2027456056

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-SA
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.