Evidence map›Paper›PMID 19289511›Full record

ArticleInfection and immunity2009

Genetics and virulence association of the Shigella flexneri sit iron transport system.

Carolyn R Fisher, Nicola M L L Davies, Elizabeth E Wyckoff, Zhengyu Feng, Edwin V Oaks, Shelley M Payne

Abstract read
In one paragraph

Article in Infection and immunity, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 28 papers.

0numbers the graph read from it
0cells of the map it votes in
28citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

28 citing papers in PubMed.

  1. Article
  2. Review
  3. Infective endocarditis caused byThe Journal of international medical research · 2025
    Article
  4. Review
  5. (p)ppGpp is required for virulence ofInfection and immunity · 2024
    Article
  6. Article
  7. Ecology, Structure, and Evolution ofAnnual review of virology · 2020
    Review
  8. Microorganisms · 2020
    Article
  9. Review
  10. Article
  11. Article
  12. Formate PromotesmBio · 2018
    Article
  13. Pathogenomics of Virulence Traits ofFrontiers in microbiology · 2018
    Article
  14. Review
  15. Shigella Iron Acquisition Systems and their Regulation.Frontiers in cellular and infection microbiology · 2016
    Review
  16. Article
  17. Review
  18. Review
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Carolyn R FisherThe University of Texas at Austin, Molecular Genetics & Microbiology, 1 University Station A5000, Austin, TX 78712-0162, USA.
Nicola M L L Davies
Elizabeth E Wyckoff
Zhengyu Feng
Edwin V Oaks
Shelley M Payne

Funding

ROLE OF CARBON METABOLISM AND VIRULENCE OF SHIGELLA FLEXNERIR37AI016935 · NIAID · UNIVERSITY OF TEXAS AUSTIN · PI Shelley M. Payne · 2003 to 2026
$6.0M
Role of carbon metabolism in virulence of Shigella flexneriR01AI016935 · NIAID · UNIVERSITY OF TEXAS AUSTIN · PI PAYNE, SHELLEY M. · 1985 to 2017
$2.6M
NIAID NIH HHS AI16935NIAID NIH HHS R01 AI016935NIAID NIH HHS R37 AI016935
6 · The paper itself

Abstract

The sit-encoded iron transport system is present within pathogenicity islands in all Shigella spp. and some pathogenic Escherichia coli strains. The islands contain numerous insertion elements and sequences with homology to bacteriophage genes. The Shigella flexneri sit genes can be lost as a result of deletion within the island. The formation of deletions was dependent upon RecA and occurred at relatively high frequency. This suggests that the sit region is inherently unstable, yet sit genes are maintained in all of the clinical isolates tested. Characterization of the sitABCD genes in S. flexneri indicates that they encode a ferrous iron transport system, although the genes are induced aerobically. The sit genes provide a competitive advantage to S. flexneri growing within epithelial cells, and a sitA mutant is outcompeted by the wild type in cultured epithelial cells. The Sit system is also required for virulence in a mouse lung model. The sitA mutant was able to infect the mice and induce a protective immune response but was avirulent compared to its wild-type parent strain.

Indexed as

AnimalsCation Transport ProteinsCell LineDysentery, BacillaryEpithelial CellsFemaleGene DeletionHumansIronLungMembrane Transport ProteinsMiceMice, Inbred BALB CShigella flexneriVirulenceVirulence FactorsCation Transport ProteinsIronMembrane Transport ProteinsSitA protein, Shigella flexneriVirulence Factors

Identifiers

PMID19289511
PMCPMC2681762

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.