Evidence map›Paper›PMID 19289036›Full record

ArticleBiophysical journal2009

Sensitivity of NFAT cycling to cytosolic calcium concentration: implications for hypertrophic signals in cardiac myocytes.

Michael T Cooling, Peter Hunter, Edmund J Crampin

Open access · bronzeAbstract read
In one paragraph

Article in Biophysical journal, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
1.3field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 41 citations in OpenAlex.

  1. Computational insights in cell physiology.Frontiers in systems biology · 2024
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  6. CaBiophysical journal · 2020
    Article
  7. Review
  8. Review
  9. Quantitative systems models illuminate arrhythmia mechanisms in heart failure: Role of the NaWiley interdisciplinary reviews. Systems biology and medicine · 2019
    Review
  10. Article
  11. Review
  12. Article
  13. Modular modelling with Physiome standards.The Journal of physiology · 2016
    Article
  14. Review
  15. Article
  16. Article
  17. Review
  18. Article
  19. Oscillatory signaling processes: the how, the why and the where.Current opinion in genetics & development · 2010
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 2 institutions in 1 country.

Michael T CoolingAuckland Bioengineering Institute, The University of Auckland, New Zealand. m.cooling@auckland.ac.nz
Peter Hunter
Edmund J Crampin
University of Auckland · NZAuckland University of Technology · NZ

Funding

Wellcome Trust
6 · The paper itself

Abstract

The nuclear factor of activated T-cell (NFAT) transcription factors play an important role in many biological processes, including pathological cardiac hypertrophy. Stimulated by calcium signals, NFAT is translocated to the nucleus where it can regulate hypertrophic genes (excitation-transcription coupling). In excitable cells, such as myocytes, calcium is a key second messenger for multiple signaling events, including excitation-contraction coupling. Whether the calcium signals due to excitation-contraction and excitation-transcription coupling coincide or how they can be differentiated is currently unclear. Here we construct a mathematical model of NFAT cycling fitted to skeletal myocyte and baby hamster kidney cell data. The model replicates key behavior with respect to sensitivity to calcineurin overexpression and to calcium oscillations. Finally, we measure the sensitivity of the system to a simulated hypertrophic calcium signal, against a background excitation-contraction coupling calcium oscillation. We find that NFAT cycling is sensitive to excitation-transcription coupling even when both calcium signals are in the same cellular compartment, thus showing that separation of the signals may not be necessary in vitro.

Indexed as

Calcium SignalingAlgorithmsAnimalsCalcineurinCalciumCell LineComputer SimulationCricetinaeCytosolModels, BiologicalMuscle CellsMuscle, SkeletalMyocytes, CardiacNFATC Transcription FactorsCalcineurinCalciumNFATC Transcription Factors

Identifiers

PMID19289036
PMCPMC2717350
OpenAlexW2027259743

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.