Evidence map›Paper›PMID 19288145›Full record

ArticleJournal of biological inorganic chemistry : JBIC : a publication of the Society of Biological Inorganic Chemistry2009

Linking conformation change to hemoglobin activation via chain-selective time-resolved resonance Raman spectroscopy of protoheme/mesoheme hybrids.

Gurusamy Balakrishnan, Mohammed Ibrahim, Piotr J Mak, Jessica Hata, James R Kincaid, Thomas G Spiro

Abstract read
In one paragraph

Article in Journal of biological inorganic chemistry : JBIC : a publication of the Society of Biological Inorganic Chemistry, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Gurusamy BalakrishnanDepartment of Chemistry, University of Washington, Seattle, WA 98195, USA. balki@u.washington.edu
Mohammed Ibrahim
Piotr J Mak
Jessica Hata
James R Kincaid
Thomas G Spiro

Funding

ULTRAVIOLET RAMAN STUDIES OF PROTEINS AND NUCLEIC ACIDSR01GM025158 · NIGMS · UNIVERSITY OF WASHINGTON · PI SPIRO, THOMAS G. · 1985 to 2014
$5.1M
Resonance Raman Studies of Mammalian Heme ProteinsR01DK035153 · NIDDK · MARQUETTE UNIVERSITY · PI KINCAID, JAMES ROBERT · 1987 to 2007
$1.6M
ASYMMETRIC HYDROCARBOXYLATION OF PROCHIRAL OLEFINSF32GM012526 · NIGMS · HARVARD UNIVERSITY · PI SHEPPARD, GEORGE S · 1988 to 1989
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NIDDK NIH HHS DK35153NIDDK NIH HHS R01 DK035153NIGMS NIH HHS GM12526NIGMS NIH HHS R01 GM025158
6 · The paper itself

Abstract

Time-resolved resonance Raman (RR) spectra are reported for hemoglobin (Hb) tetramers, in which the alpha and beta chains are selectively substituted with mesoheme. The Soret absorption band shift in mesoheme relative to protoheme permits chain-selective recording of heme RR spectra. The evolution of these spectra following HbCO photolysis shows that the geminate recombination rates and the yields are the same for the two chains, consistent with recent results on (15)N-heme isotopomer hybrids. The spectra also reveal systematic shifts in the deoxyheme nu (4) and nu (Fe-His) RR bands, which are anticorrelated. These shifts are resolved for the successive intermediates in the protein structure, which have previously been determined from time-resolved UV RR spectra. Both chains show Fe-His bond compression in the immediate photoproduct, which relaxes during the formation of the first intermediate, R(deoxy) (0.07 micros), in which the proximal F-helix is proposed to move away from the heme. Subsequently, the Fe-His bond weakens, more so for the alpha chains than for the beta chains. The weakening is gradual for the beta chains, but is abrupt for the alpha chains, coinciding with completion of the R-T quaternary transition, at 20 micros. Since the transition from fast- to slow-rebinding Hb also occurs at 20 micros, the drop in the alpha chain nu (Fe-His) supports the localization of ligation restraint to tension in the Fe-His bond, at least in the alpha chains. The mechanism is more complex in the beta chains.

Indexed as

alpha-Globinsbeta-GlobinsCarbon MonoxideErythrocytesHemeHemoglobin AHumansMesoporphyrinsPhotolysisProtein ConformationSpectrum Analysis, Ramanalpha-Globinsbeta-GlobinsCarbon MonoxideHemeHemoglobin Amesoporphyrin IXMesoporphyrins

Identifiers

PMID19288145
PMCPMC2880192

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.