Evidence map›Paper›PMID 19286988›Full record

ArticleEukaryotic cell2009

Nested genes CDA12 and CDA13 encode proteins associated with membrane trafficking in the ciliate Tetrahymena thermophila.

Erica Zweifel, Joshua Smith, Daniel Romero, Thomas H Giddings, Mark Winey, Jerry Honts, Jeff Dahlseid, Brent Schneider, Eric S Cole

Open access · diamondAbstract read
In one paragraph

Article in Eukaryotic cell, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
1.6field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 22 citations in OpenAlex.

  1. Article
  2. TheMolecular biology of the cell · 2023
    Article
  3. Anterior-posterior pattern formation in ciliates.The Journal of eukaryotic microbiology · 2022
    Review
  4. Article
  5. Review
  6. Article
  7. Article
  8. Review
  9. Article
  10. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 6 institutions in 1 country.

Erica ZweifelBiology Department, St. Olaf College, 1520 St. Olaf Ave., Northfield, MN 55057, USA.
Joshua Smith
Daniel Romero
Thomas H Giddings
Mark Winey
Jerry Honts
Jeff Dahlseid
Brent Schneider
Eric S Cole
St. Olaf College · USUniversity of Colorado Boulder · USDrake University · USGustavus Adolphus College · USMissouri State University · USUniversity of Minnesota Medical Center · US

Funding

Tetrahymena Basal Body DuplicationR01GM074746 · NIGMS · UNIVERSITY OF COLORADO · PI WINEY, MARK · 2006 to 2015
$3.0M
NIGMS NIH HHS R01 GM074746
6 · The paper itself

Abstract

We describe a novel pair of nested genes, CDA12 and CDA13, from Tetrahymena thermophila. Both are implicated in membrane trafficking associated with cell division and conjugation. Green fluorescent protein localization reveals Cda12p decoration of diverse membrane-bound compartments, including mobile, subcortical tubulovesicular compartments; perinuclear vesicles; and candidates for recycling endosomes. Cda13p decorates intracellular foci located adjacent to cortically aligned mitochondria and their neighboring Golgi networks. The expression of antisense CDA12 RNA in transformants produces defects in cytokinesis, macronuclear segregation, and the processing of pinosomes to downstream compartments. Antisense CDA13 RNA expression produces a conjugation phenotype, resulting in the failure of mating pairs to separate, as well as failures in postconjugation cytokinesis and macronuclear fission. This study offers insight into the membrane trafficking events linking endosome and Golgi network activities, cytokinesis, and karyokinesis and the unique membrane-remodeling events that accompany conjugation in the ciliate T. thermophila. We also highlight an unusual aspect of genome organization in Tetrahymena, namely, the existence of nested, antisense genes.

Indexed as

Nested GenesAnimalsCell MembraneCytokinesisMolecular Sequence DataProtein TransportProtozoan ProteinsTetrahymena thermophilaProtozoan Proteins

Identifiers

PMID19286988
PMCPMC2698308
OpenAlexW2169292485

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.