Evidence map›Paper›PMID 19286811›Full record

ArticleJournal of bacteriology2009

Thioredoxins in redox maintenance and survival during oxidative stress of Bacteroides fragilis.

Michael A Reott, Anita C Parker, Edson R Rocha, C Jeffrey Smith

Abstract read
In one paragraph

Article in Journal of bacteriology, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 25 papers.

0numbers the graph read from it
0cells of the map it votes in
25citing papers in PubMed
1.3field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

25 citing papers in PubMed, 53 citations in OpenAlex.

  1. Genomic Characterization of the Honeybee-Probiotic StrainAnimals : an open access journal from MDPI · 2025
    Article
  2. Article
  3. Article
  4. Frontiers in microbiology · 2024
    Article
  5. Microbiology spectrum · 2023
    Article
  6. Article
  7. Analysis of SixInfection and immunity · 2022
    Article
  8. Deciphering the Role of Multiple Thioredoxin Fold Proteins ofInternational journal of molecular sciences · 2020
    Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Michael A ReottDepartment of Microbiology and Immunology, East Carolina University, Brody School of Medicine, 600 Moye Blvd., Greenville, NC 27834, USA.
Anita C Parker
Edson R Rocha
C Jeffrey Smith
East Carolina University · US

Funding

ROLE OF B.FRAGILIS OXYGEN STRESS RESPONSE IN INFECTIONR01AI040588 · NIAID · EAST CAROLINA UNIVERSITY · PI SMITH, CHARLES J. · 1999 to 2014
$3.5M
ROLE OF B.FRAGILIS OXYGEN STRESS RESPONSE IN INFECTIONR56AI040588 · NIAID · EAST CAROLINA UNIVERSITY · PI ROCHA, EDSON R, SMITH, CHARLES J. · 2009 to 2009
$334k
NIAID NIH HHS AI40588NIAID NIH HHS R01 AI040588NIAID NIH HHS R56 AI040588
6 · The paper itself

Abstract

The anaerobe Bacteroides fragilis is a gram-negative, opportunistic pathogen that is highly aerotolerant and can persist in aerobic environments for extended periods. In this study, the six B. fragilis thioredoxins (Trxs) were investigated to determine their role during oxidative stress. Phylogenetic analyses of Trx protein sequences indicated that four of the six Trxs (TrxA, TrxC, TrxD, and TrxF) belong to the M-type Trx class but were associated with two different M-type lineages. TrxE and TrxG were most closely associated to Y-type Trxs found primarily in cyanobacteria. Single and multiple trx gene deletions were generated to determine functional differences between the Trxs. The trxA gene was essential, but no anaerobic growth defects were observed for any other single trx deletion or for the DeltatrxC DeltatrxD::cfxA DeltatrxE DeltatrxF DeltatrxG quintuple mutant. Regulation of the trx genes was linked to the oxidative stress response, and all were induced by aerobic conditions. The DeltatrxC DeltatrxE DeltatrxF DeltatrxG and the DeltatrxC DeltatrxD::cfxA DeltatrxE DeltatrxF DeltatrxG multiple deletion strains were impaired during growth in oxidized media, but single trx gene mutants did not have a phenotype in this assay. TrxD was protective during exposure to the thiol oxidant diamide, and expression of trxD was induced by diamide. Diamide-induced expression of trxC, trxE, and trxF increased significantly in a trxD mutant strain, suggesting that there is some capacity for compensation in this complex Trx system. These data provide insight into the role of individual Trxs in the B. fragilis oxidative stress response.

Indexed as

Bacterial ProteinsBacteroides fragilisBlotting, NorthernDiamideGene DeletionOxidation-ReductionOxidative StressPhylogenyReverse Transcriptase Polymerase Chain ReactionSulfhydryl ReagentsThioredoxinsBacterial ProteinsDiamideSulfhydryl ReagentsThioredoxins

Identifiers

PMID19286811
PMCPMC2687162
OpenAlexW2098953256

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.