Evidence map›Paper›PMID 19286348›Full record

ArticleJournal of autoimmunity2009

Analysis of T cell receptor beta chains that combine with dominant conserved TRAV5D-4*04 anti-insulin B:9-23 alpha chains.

Li Zhang, Jean M Jasinski, Masakazu Kobayashi, Bennett Davenport, Kelly Johnson, Howard Davidson, Maki Nakayama, Kathryn Haskins, George S Eisenbarth

Abstract read
In one paragraph

Article in Journal of autoimmunity, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 24 papers.

0numbers the graph read from it
0cells of the map it votes in
24citing papers in PubMed
1.7field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

24 citing papers in PubMed, 30 citations in OpenAlex.

  1. Article
  2. Article
  3. Aire mediates tolerance to insulin through thymic trimming of high-affinity T cell clones.Proceedings of the National Academy of Sciences of the United States of America · 2024
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  12. Monoclonal antibody blocking the recognition of an insulin peptide-MHC complex modulates type 1 diabetes.Proceedings of the National Academy of Sciences of the United States of America · 2014
    Article
  13. Article
  14. Targeting the trimolecular complex.Clinical immunology (Orlando, Fla.) · 2013
    Review
  15. Review
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  19. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 1 country.

Li ZhangBarbara Davis Center for Childhood Diabetes, University of Colorado Denver, Aurora, CO 80045, USA.
Jean M Jasinski
Masakazu Kobayashi
Bennett Davenport
Kelly Johnson
Howard Davidson
Maki Nakayama
Kathryn Haskins
George S Eisenbarth
University of Colorado Denver · USNational Jewish Health · US

Funding

Virginia Mason/UCHSC Autoimmune Prevention CenterU19AI050864 · NIAID · UNIVERSITY OF COLORADO DENVER · PI EISENBARTH, GEORGE S · 2001 to 2011
$29.2M
UCHSC DIABETES ENDOCRINOLOGY RESEARCH CENTERP30DK057516 · NIDDK · UNIVERSITY OF COLORADO DENVER · PI HUTTON, JOHN C · 2000 to 2010
$14.0M
IN VIVO NOD EVALUATION OF A PATHOGENIC INSULIN PEPTIDER01DK055969 · NIDDK · UNIVERSITY OF COLORADO DENVER · PI EISENBARTH, GEORGE S · 1998 to 2009
$2.2M
STRUCTURE PEPTIDE/CONSERVED T CELL RECEPTOR DETERMINING DIABETESR00DK080885 · NIDDK · UNIVERSITY OF COLORADO DENVER · PI NAKAYAMA, MAKI · 2010 to 2012
$742k
Structure Peptide/Conserved T-cell Receptor Determining DiabetesK99DK080885 · NIDDK · UNIVERSITY OF COLORADO DENVER · PI NAKAYAMA, MAKI · 2008 to 2009
$156k
NIAID NIH HHS U19 AI050864NIDDK NIH HHS DK080885NIDDK NIH HHS DK55969NIDDK NIH HHS K99 DK080885NIDDK NIH HHS P30 DK057516NIDDK NIH HHS P30 DK57516NIDDK NIH HHS R00 DK080885NIDDK NIH HHS R01 DK055969PHS HHS 2U19A1050864
6 · The paper itself

Abstract

objectiveThe objective of this study was to define the spectrum of TCR beta chains permissive for T cells with alpha chains containing the conserved TRAV5D-4*04 sequence to target the insulin B:9-23 peptide, a major epitope for initiation of diabetes in the NOD mouse. MATERIALS AND

methodsWe produced T cell hybridomas from mice with single T cell receptors (BDC12-4.1 TCR alpha(+)beta(+) double transgenic mice and BDC12-4.4 TCR alpha(+)beta(+) double retrogenic mice) or from mice with only the corresponding alpha chains transgene or retrogene and multiple endogenous TCR beta chains.

resultsHybridomas with the complete BDC12-4.1 and BDC12-4.4 T cell receptors, despite having markedly different TCR beta chains, responded to similar B:9-23 peptides. Approximately 1% of the hybridomas from mice with the fixed TRAV5D-4*04 alpha chains and multiple endogenous beta chains responded to B:9-23 peptides while the majority of hybridomas with different beta chains did not respond. There was no apparent conservation of TCR beta chain sequences in the responding hybridomas.

conclusionsApproximately 1% of hybridomas utilizing different TCR beta chains paired with the conserved TRAV5D-4*04 containing alpha chains respond to insulin peptide B:9-23. Therefore, TCR beta chain sequences make an important contribution to insulin B:9-23 peptide recognition but multiple beta chain sequences are permissive for recognition.

Indexed as

AnimalsAutoantigensConserved SequenceDiabetes Mellitus, Type 1Epitope MappingHybridomasImmunodominant EpitopesInsulinMiceMice, Inbred NODMice, TransgenicPeptide FragmentsProtein BindingReceptors, Antigen, T-Cell, alpha-betaT-Cell Antigen Receptor SpecificityT-LymphocytesAutoantigensImmunodominant EpitopesInsulininsulin B (9-23)Peptide FragmentsReceptors, Antigen, T-Cell, alpha-beta

Identifiers

PMID19286348
PMCPMC4383244
OpenAlexW1995301737

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.