Evidence map›Paper›PMID 19281848›Full record

ArticleProtein expression and purification2009

E. coli expression of a soluble, active single-chain antibody variable fragment containing a nuclear localization signal.

Hairong Xiong, Shuyi Li, Zhanqiu Yang, Richard R Burgess, William S Dynan

Open access · greenAbstract read
In one paragraph

Article in Protein expression and purification, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
1.5field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 14 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Article
  5. Article
  6. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 3 institutions in 2 countries.

Hairong XiongInstitute of Molecular Medicine and Genetics, Medical College of Georgia, 1120 15th Street, Augusta, GA 30912, USA.
Shuyi Li
Zhanqiu Yang
Richard R Burgess
William S Dynan
Augusta University · USWuhan University · CNUniversity of Wisconsin–Madison · US

Funding

Nanomedicine Center for Nucleoprotein MachinesPN2EY018244 · NEI · RICE UNIVERSITY · PI BAO, GANG · 2006 to 2015
$24.4M
Regulation of DNA Double-Strand Break RepairR01CA098239 · NCI · MEDICAL COLLEGE OF GEORGIA (MCG) · PI DYNAN, WILLIAM S. · 2004 to 2013
$2.1M
NCI NIH HHS CA 98239NCI NIH HHS R01 CA098239NEI NIH HHS EY018244NEI NIH HHS PN2 EY018244
6 · The paper itself

Abstract

Single-chain antibody variable fragment (scFv) proteins consist of an antibody heavy chain variable sequence joined via a flexible linker to a light chain variable sequence. Prior work has shown that ScFv 18-2 binds the DNA-dependent protein kinase catalytic subunit (DNA-PKcs) and sensitizes cancer cells to radiation following nuclear microinjection. A potential clinical delivery strategy is based on modification of the scFv so that it can be taken up into cells and imported to the nucleus. This will require development of an expression system for a nuclear localization signal (NLS)-tagged scFv derivative. We found, however, that addition of the highly basic NLS severely compromised expression in the host-vector system used for the parental scFv. After testing a variety of host strains, fusion partners, and NLS sequences and placements, successful expression was obtained with a construct containing a stabilizing N-terminal maltose binding protein tag and a single, optimized, C-terminal NLS moiety. Amylose affinity-purified ScFv 18-2 NLS protein was stable to storage at 4 degrees C in the presence of glycerol or trehalose, bound selectively to an epitope peptide, and was cleavable at an engineered Factor Xa protease site. Following lipid-mediated uptake into cultured cells, NLS-tagged ScFv 18-2, unlike the parental ScFv 18-2, localized predominantly in the cell nucleus.

Indexed as

Blotting, WesternCell NucleusChromatography, AffinityCloning, MolecularDNA-Activated Protein KinaseEscherichia coliHeLa CellsHumansImmunoglobulin Variable RegionNuclear Localization SignalsProtein EngineeringProtein FoldingProtein StabilityRecombinant Fusion ProteinsSolubilityDNA-Activated Protein KinaseImmunoglobulin Variable RegionNuclear Localization SignalsRecombinant Fusion Proteins

Identifiers

PMID19281848
PMCPMC2893147
OpenAlexW1977593051

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.