Evidence map›Paper›PMID 19280628›Full record

ArticleCancer2009

Genetic polymorphisms in DNA repair genes as modulators of Hodgkin disease risk.

Randa El-Zein, Claudia M Monroy, Carol J Etzel, Andrea C Cortes, Yun Xing, Amanda L Collier, Sara S Strom

Open access · greenAbstract read
In one paragraph

Article in Cancer, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers, 5 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed, 5 pooled it
2.7field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 5 syntheses or guidelines pooled it, 45 citations in OpenAlex.

  1. Aging · 2018
    Pooled it
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  6. The Role of DNA Repair (Medicina (Kaunas, Lithuania) · 2024
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  14. Influence of XPC, XPD, XPF, and XPG gene polymorphisms on the risk and the outcome of acute myeloid leukemia in a Romanian population.Tumour biology : the journal of the International Society for Oncodevelopmental Biology and Medicine · 2016
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 1 institution in 1 country.

Randa El-ZeinDepartment of Epidemiology, The University of Texas M. D. Anderson Cancer Center, Houston, Texas 77030-1439, USA. relzein@mdanderson.org
Claudia M Monroy
Carol J Etzel
Andrea C Cortes
Yun Xing
Amanda L Collier
Sara S Strom
The University of Texas MD Anderson Cancer Center · US

Funding

Pilot Project ProgramP30ES007784 · NIEHS · UNIVERSITY OF TX MD ANDERSON CAN CTR · PI RICHIE, ELLEN R · 1996 to 2011
$16.4M
ECOGENETIC STUDY OF LUNG CANCER IN MINORITIESR01CA055769 · NCI · UNIVERSITY OF TX MD ANDERSON CAN CTR · PI SPITZ, MARGARET R · 1991 to 2008
$5.3M
Molecular Biomarkers as Predictors of Hodgkin's DiseaseR01CA098549 · NCI · UNIVERSITY OF TX MD ANDERSON CAN CTR · PI EL-ZEIN, RANDA A · 2003 to 2007
$1.4M
Chromosomal Aberrations and Risk for Familial Lung CancerR01CA123208 · NCI · UNIVERSITY OF TX MD ANDERSON CAN CTR · PI ETZEL, CAROL J · 2006 to 2009
$1.1M
NCI NIH HHS CA55769NCI NIH HHS CA98549NCI NIH HHS R01 CA055769NCI NIH HHS R01 CA098549NCI NIH HHS R01 CA123208NIEHS NIH HHS P30 ES007784
6 · The paper itself

Abstract

backgroundAlthough the pathogenesis of Hodgkin disease (HD) remains unknown, the results of epidemiologic studies suggest that heritable factors are important in terms of susceptibility. Polymorphisms in DNA repair genes may contribute to individual susceptibility for development of different cancers. However, to the authors' knowledge, few studies to date have investigated the role of such polymorphisms as risk factors for development of HD.

methodsThe authors evaluated the relation between polymorphisms in 3 nucleotide excision repair pathway genes (XPD [Lys751Gln], XPC [Lys939Gln], and XPG [Asp1104His]), the base excision repair XRCC1 (Arg399Gln), and double-strand break repair XRCC3 (Thr241Met) in a population of 200 HD cases and 220 matched controls. Variants were investigated independently and in combination; odd ratios (OR) were calculated.

resultsA positive association was found for XRCC1 gene polymorphism Arg399Gln (OR, 1.77; 95% confidence interval [95% CI], 1.16-2.71) and risk of HD. The combined analysis demonstrated that XRCC1/XRCC3 and XRCC1/XPC polymorphisms were associated with a significant increase in HD risk. XRCC1 Arg/Arg and XRCC3 Thr/Met genotypes combined were associated with an OR of 2.38 (95% CI, 1.24-4.55). The XRCC1 Arg/Gln and XRCC3 Thr/Thr, Thr/Met, and Met/Met genotypes had ORs of 1.88 (95% CI, 1.02-4.10), 1.97 (95% CI, 1.05-3.73), and 4.13 (95% CI, 1.50-11.33), respectively. XRCC1 Gln/Gln and XRCC3 Thr/Thr variant led to a significant increase in risk, with ORs of 3.00 (95% CI, 1.15-7.80). Similarly, XRCC1 Arg/Gln together with XPC Lys/Lys was found to significantly increase the risk of HD (OR, 2.14; 95% CI, 1.09-4.23).

conclusionsThese data suggest that genetic polymorphisms in DNA repair genes may modify the risk of HD, especially when interactions between the pathways are considered.

Indexed as

Polymorphism, GeneticAdultDNA-Binding ProteinsDNA Excision Repair Protein ERCC-5DNA RepairEndonucleasesFemaleGenetic Predisposition to DiseaseGenotypeHodgkin DiseaseHumansMaleMiddle AgedNuclear ProteinsRisk FactorsTranscription FactorsDNA-Binding ProteinsDNA Excision Repair Protein ERCC-5EndonucleasesERCC2 protein, humanNuclear ProteinsTranscription FactorsXeroderma Pigmentosum Group D ProteinXPC protein, humanX-ray Repair Cross Complementing Protein 1X-ray repair cross complementing protein 3XRCC1 protein, human

Identifiers

PMID19280628
PMCPMC2854485
OpenAlexW2046226911

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.