Evidence map›Paper›PMID 19280342›Full record

ArticleAnnals of biomedical engineering2009

Vessel diameter measurement from intravital microscopy.

Jaesung Lee, Artit C Jirapatnakul, Anthony P Reeves, William E Crowe, Ingrid H Sarelius

Abstract read
In one paragraph

Article in Annals of biomedical engineering, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Jaesung LeeSchool of Electrical and Computer Engineering, Cornell University, 357 Rhodes Hall, Ithaca, NY 14850, USA. jl569@cornell.edu
Artit C Jirapatnakul
Anthony P Reeves
William E Crowe
Ingrid H Sarelius

Funding

VASCULAR RELATIONS OF BLOOD CELLS AND PROTEINSP01HL018208 · NHLBI · UNIVERSITY OF ROCHESTER · PI WAUGH, RICHARD E · 1985 to 2014
$24.7M
Mechanisms of Metabolic VasodilationR01HL076414 · NHLBI · UNIVERSITY OF ROCHESTER · PI SARELIUS, INGRID H · 2004 to 2007
$1.3M
NHLBI NIH HHS HL18208NHLBI NIH HHS HL76414NHLBI NIH HHS P01 HL018208NHLBI NIH HHS R01 HL076414
6 · The paper itself

Abstract

The blood vessel diameter is often measured in microcirculation studies to quantify the effects of various stimuli. Intravital video microscopy is used to measure the change in vessel diameter by first recording the video and analyzing it using electronic calipers or by using image shearing technique. Manual measurement using electronic calipers or image shearing is time-consuming and prone to measurement error, and automated measurement can serve as an alternative that is faster and more reliable. In this paper, a new feature-based tracking algorithm is presented for automatically measuring diameter of vessels in intravital video microscopy image sequences. Our method tracks the vessel diameter throughout the entire image sequence once the diameter is marked in the first image. The parameters were calibrated using the intravital videos with manual ground truth measurements. The experiment with 10 synthetic videos and 20 intravital microscopy videos, including 10 fluorescence confocal and 10 non-confocal transmission, shows that the measurement can be performed accurately.

Indexed as

AlgorithmsBlood VesselsImage Processing, Computer-AssistedMicrocirculationMicroscopy, Electron, TransmissionMicroscopy, FluorescenceMicroscopy, VideoModels, CardiovascularOrgan Size

Identifiers

PMID19280342
PMCPMC2754796

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.